PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY72799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 270aa MW: 30251.3 Da PI: 8.0218 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 23.5 | 9.5e-08 | 46 | 71 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ykt++C f++ G C++ ++C FaH++ TEY72799.1 46 YKTRPCFQFRA-GSCPFAENCEFAHSM 71 9*****97777.*************95 PP | |||||||
2 | zf-CCCH | 29.8 | 1.1e-09 | 166 | 192 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +k +lC + tG C yG +C+FaHg+ TEY72799.1 166 WKARLCTKWDLTGMCVYGKNCTFAHGF 192 7899*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MDDMCEKEMP VDPNLTLNRS ERSFQFDVES DPPNKRAKNA IEKMLYKTRP CFQFRAGSCP 60 FAENCEFAHS MEELRELPHS HKEEPMRLSE QPREVSQIPV VGLNEVKHRP SSRQLCKGFL 120 SAAGCQNGEK CLLIHNEHYM ERKSAAICLL PGSGSGFKSS GSSSNWKARL CTKWDLTGMC 180 VYGKNCTFAH GFAELQHYRG RQEKKEDSGS SALGGNQVAS IPAKACVGHV PYAYHVGVPP 240 RRLSGEIAIQ NWKGPDKISK IYGDWIDDLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 3e-40 | C3H family protein |