PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY72712.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 201aa    MW: 22570.4 Da    PI: 11.3005
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY72712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH42.98e-1481106126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +kt++C+ +  tG+C++G++C+FaHg
  TEY72712.1  81 WKTSICNKWELTGYCPFGSKCHFAHG 106
                 8************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDMHRGNGFS NGNVVQIISG NDGNRLSQGR NSRYRLWESL KRRRGQTKGG TARSSILRKA  60
ALSFTMSSQK LERVALKPSN WKTSICNKWE LTGYCPFGSK CHFAHGAAEL HNHGGLDSEV  120
KDASTQGEVA TKTSVDSIPF LIPMATTLES RHKGCRMWFR RPDTDRHRNG RGWTKLARYT  180
VTGSRTSSRH WGRFKVADDG T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.12e-21C3H family protein