PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY72099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 350aa MW: 38316.1 Da PI: 6.8336 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.8 | 9.2e-09 | 99 | 123 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykt+lC+ f++ GtC+y +C+FaH+ TEY72099.1 99 YKTKLCCKFRA-GTCPYITNCNFAHS 123 9**********.*************8 PP | |||||||
2 | zf-CCCH | 17.4 | 7.9e-06 | 170 | 195 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 yk + C+ f+ C+yG++C+F H+ TEY72099.1 170 YKGRHCKKFYTEEGCPYGENCTFLHD 195 78888********************7 PP | |||||||
3 | zf-CCCH | 42.3 | 1.2e-13 | 240 | 265 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt++C+ + tG+C++G++C+FaHg TEY72099.1 240 WKTRICNKWELTGYCPFGSKCHFAHG 265 8************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MDYRRENRLS SGDVVHVLPR SSQNPVNETW ESGLVDQAVW ATEDDYGMWN GEASFDTNSN 60 SSYDGARAGS EPPNKRSRGS NSGDGAASNR SKAIGKMFYK TKLCCKFRAG TCPYITNCNF 120 AHSVEELRKP PDNWQEIVAA HEEERASSAE PREEFQIPIV GVSDETQRSY KGRHCKKFYT 180 EEGCPYGENC TFLHDEQSKA RESVAISLGP GSGTGTGNSN GGGSGYGGSM SGPTLKPSNW 240 KTRICNKWEL TGYCPFGSKC HFAHGAAELH NFGGGATDSD AKDPSTPDAK QLVRTSVDVI 300 AGLPHTEGYH MGIPPQRLSN TIQRTGQRPN QKWKGPDKIS KIYGDWIDDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 1e-116 | C3H family protein |