PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71037.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 407aa MW: 45317.9 Da PI: 8.7865

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.3	6.2e-06	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TEY71037.1 52 FVCEVCGKGFQRDQNLQLHRRGH 74 89*******************88 PP
2	zf-C2H2	11.8	0.00075	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C k++ +s+ k H +t+ TEY71037.1 128 WKCDKCAKRYAVQSDWKAHTKTC 150 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MTDNESTISS QNPLTSGSSP PPKKKRNLPG TPDPEAEVIA LSPKTLMATN RFVCEVCGKG 60 FQRDQNLQLH RRGHNLPWKL KQRSSKEVRK RVYVCPEKAC VHHHPSRALG DLTGIKKHFC 120 RKHGEKKWKC DKCAKRYAVQ SDWKAHTKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA 180 QETARVTAAT HAPNHINYHF LGMPQHFPSI FKPINDQTLD PIHELTHSTQ DHHPPFPNPS 240 FSNLPPSTFY NLNWDITHTS PNIPNHKEAT VSSLFSTHQN QISSNHEAEA SARMSATALL 300 QKAAQIGATT TDPAMILGSF GVKCNDNGLD GNRLCGLYST SSVTSGFGSD VESSVNENSA 360 MNGQLQMYTC SKRRRVQSYE EEGGETRDFL GVGIHPICHP SSINGWI

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MTDNESTISS QNPLTSGSSP PPKKKRNLPG TPDPEAEVIA LSPKTLMATN RFVCEVCGKG  60
FQRDQNLQLH RRGHNLPWKL KQRSSKEVRK RVYVCPEKAC VHHHPSRALG DLTGIKKHFC  120
RKHGEKKWKC DKCAKRYAVQ SDWKAHTKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA  180
QETARVTAAT HAPNHINYHF LGMPQHFPSI FKPINDQTLD PIHELTHSTQ DHHPPFPNPS  240
FSNLPPSTFY NLNWDITHTS PNIPNHKEAT VSSLFSTHQN QISSNHEAEA SARMSATALL  300
QKAAQIGATT TDPAMILGSF GVKCNDNGLD GNRLCGLYST SSVTSGFGSD VESSVNENSA  360
MNGQLQMYTC SKRRRVQSYE EEGGETRDFL GVGIHPICHP SSINGWI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	376	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-137	C2H2 family protein