PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY70517.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 386aa MW: 44282.6 Da PI: 8.6128

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY70517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.7	9.8e-11	38	112	2	75
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtses 75 W+++e laL+++r+ +e ++ + We+ s+++ e g++rs ++Ck+k+e++++ + ++++++++ TEY70517.1 38 WSNDELLALLKLRSTTEIWFPDF-----TWEHFSRHIcsnwklGELGYKRSGVECKDKFEEVSRHFSSSSSSNNNNNKNY 112 ******************998.....9***999**************************999964433 PP
2	trihelix	94.5	1e-29	281	363	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rW+++ev aLi++r e++ ++g+ k+plWe++s+ m+e g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpyf+ql TEY70517.1 281 RWPREEVVALINLRCETGG-GGEGSNKGPLWERISQGMKEMGYKRSAKRCKEKWENINKYFRKTKDSSKKR-SVNSRTCPYFHQL 363 8************9976.57888*****************************************8.78888*****9 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MFDGSEQFIA SSRASFHGNP CFDPYAPPLL ADRSADPWSN DELLALLKLR STTEIWFPDF 60 TWEHFSRHIC SNWKLGELGY KRSGVECKDK FEEVSRHFSS SSSSNNNNNK NYNELDEMYQ 120 EAHHIHEMDD QDPTAKKPQD VIINPTIKRK RRDKLDKFKG FCEAVVTKMM SKQEELHNKL 180 IDDIVTRDEE RIAREDAWRI QETKRIQTEI ETRAKEQKSA AERQAVIIQF LKQFTTAPEE 240 KQQQTGKFDT NTNSKTNSNS LCKSTPPQTP VGPQSSPAGR RWPREEVVAL INLRCETGGG 300 GEGSNKGPLW ERISQGMKEM GYKRSAKRCK EKWENINKYF RKTKDSSKKR SVNSRTCPYF 360 HQLSCLYGDG TIVAPNAAAA TAEINQ

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MFDGSEQFIA SSRASFHGNP CFDPYAPPLL ADRSADPWSN DELLALLKLR STTEIWFPDF  60
TWEHFSRHIC SNWKLGELGY KRSGVECKDK FEEVSRHFSS SSSSNNNNNK NYNELDEMYQ  120
EAHHIHEMDD QDPTAKKPQD VIINPTIKRK RRDKLDKFKG FCEAVVTKMM SKQEELHNKL  180
IDDIVTRDEE RIAREDAWRI QETKRIQTEI ETRAKEQKSA AERQAVIIQF LKQFTTAPEE  240
KQQQTGKFDT NTNSKTNSNS LCKSTPPQTP VGPQSSPAGR RWPREEVVAL INLRCETGGG  300
GEGSNKGPLW ERISQGMKEM GYKRSAKRCK EKWENINKYF RKTKDSSKKR SVNSRTCPYF  360
HQLSCLYGDG TIVAPNAAAA TAEINQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	154	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	8e-59	Trihelix family protein