PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY68879.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 522aa    MW: 57629.2 Da    PI: 5.1576
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY68879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS438.64.6e-1341645191374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+ L++cAeav+++d++la+al++++  la +++ +m+++a+yf+eALa+r++r    ly   p s+      ++ l++   f+e++P+lkf+h+taN
  TEY68879.1 164 LVHSLMACAEAVQKEDFKLAEALVKNIGFLAVSQAGAMRKVATYFAEALARRIYR----LY---PDSAF-----TDLLQM--HFYETCPYLKFAHFTAN 248
                 689****************************************************....44...33333.....344333..5**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIle+++g + vH++Df+++qG+QWp+LlqaLa Rp+gpp++R+T+vg+p+++++++l+e+g++L ++A++++v+fe++ lv+++l+dl+   L+ ++
  TEY68879.1 249 QAILESFAGRDLVHVVDFSMKQGMQWPPLLQALALRPGGPPRFRLTAVGPPSTDNTDQLKEIGRKLGQLANSINVEFEYRGLVTNSLADLTAALLERRE 347
                 *************************************************************************************************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 gE++aVn+++ lh ll++++++e     vL++v +l+P++++vveqea+hn++ F +rf+eal+yys+lfdsle+  +  s+e++++++ +lgr+i+nv
  TEY68879.1 348 GETVAVNSIFDLHPLLARPGAIET----VLRVVTELKPEIFTVVEQEANHNGSVFSDRFTEALHYYSTLFDSLESC-GGGSDEDRVMSEIYLGRQICNV 441
                 ****************99999999....*********************************************998.89999***************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vacega+r+erhetl++Wr+rl++aGF++v+++++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpLv++SaWr
  TEY68879.1 442 VACEGADRVERHETLGQWRRRLGAAGFEAVHIGSNAHKQASMLLELFGgGDGYRVEERHGCLMLGWHTRPLVATSAWR 519
                 *****************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MKRELTNHDN FSSSCSSSSK PPMWLCDADD ELFAVLGYSV KPSDMADVAQ KIEHLEQVMC  60
SVENDGLSQL ASDTTHYNPS DLFSWLESMI SGLNPTPDFD SAVNRMAVDS DFGSDLTAIP  120
GKAVYPNPRA KPPSPAKKLK LSPQETESSE SIVMVDSQEN GIRLVHSLMA CAEAVQKEDF  180
KLAEALVKNI GFLAVSQAGA MRKVATYFAE ALARRIYRLY PDSAFTDLLQ MHFYETCPYL  240
KFAHFTANQA ILESFAGRDL VHVVDFSMKQ GMQWPPLLQA LALRPGGPPR FRLTAVGPPS  300
TDNTDQLKEI GRKLGQLANS INVEFEYRGL VTNSLADLTA ALLERREGET VAVNSIFDLH  360
PLLARPGAIE TVLRVVTELK PEIFTVVEQE ANHNGSVFSD RFTEALHYYS TLFDSLESCG  420
GGSDEDRVMS EIYLGRQICN VVACEGADRV ERHETLGQWR RRLGAAGFEA VHIGSNAHKQ  480
ASMLLELFGG GDGYRVEERH GCLMLGWHTR PLVATSAWRL AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein