PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY66531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 290aa MW: 32116 Da PI: 9.1169 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 30 | 8.9e-10 | 16 | 35 | 8 | 27 |
GGGGTS--TTTTT-SS-SSS CS zf-CCCH 8 ffartGtCkyGdrCkFaHgp 27 ++++tGtCkyG++C+++H++ TEY66531.1 16 HYLKTGTCKYGSTCRYHHPK 35 8*****************96 PP | |||||||
2 | zf-CCCH | 33.6 | 6.7e-11 | 55 | 78 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C+f++r+G CkyG CkF+H++ TEY66531.1 55 KPCPFYMRMGLCKYGYACKFHHPQ 78 69********************97 PP | |||||||
3 | zf-CCCH | 38.7 | 1.7e-12 | 177 | 202 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++Cr+f+++G CkyG+ Ck++H++ TEY66531.1 177 DQPECRYFMEYGSCKYGSECKYHHPR 202 689*********************96 PP | |||||||
4 | zf-CCCH | 34.1 | 4.7e-11 | 222 | 248 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++++ +G+C+yG C+F H++ TEY66531.1 222 PGQPVCSYYSLYGICNYGTACRFDHPM 248 5789*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MFRWLVLILI NMFFQHYLKT GTCKYGSTCR YHHPKDRQAD FLLNMLGLPM RQDAKPCPFY 60 MRMGLCKYGY ACKFHHPQPT LAASNVLPVM GPVYGSGGSA VVPSSGVSSA SISGASLSKA 120 TYFASSLPQS YLPLFLPQSQ GWNTYMGNAS PLPVSSVLTG PVPNRQQSVL YLPERPDQPE 180 CRYFMEYGSC KYGSECKYHH PREKLSQLVS TSIVPLGLPL RPGQPVCSYY SLYGICNYGT 240 ACRFDHPMDR HNYAYGLSVP PTAFAYPSPA PYQRIASLVP VADVSPTKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G04990.2 | 1e-55 | C3H family protein |