PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY66514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25176.6 Da PI: 7.5732 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 69.4 | 3.2e-22 | 11 | 59 | 3 | 51 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ien + rq t++kR++gi+KKA EL vLCd++va+i+f+++g+l ++s TEY66514.1 11 IENPTSRQLTYTKRKEGIIKKAGELAVLCDTDVALIMFAPSGRLASFAS 59 9*******************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGRKKLSMRL IENPTSRQLT YTKRKEGIIK KAGELAVLCD TDVALIMFAP SGRLASFASN 60 GRIEDILLRF VDRPDELRGG PINHEEELEE KLDKLTRKQR ESQEKMRYYE PNVEKINSAI 120 EAGVYQQFLT TAIQRIQTSK AKLLGNQLGL ESTENVEVQA ATMQMDDAVS LIGHSAEGNH 180 ARQMRLNMDE NQSGSSSAAG PHLSLGFIES QRMRNKSCNI SMEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77950.2 | 9e-27 | MIKC_MADS family protein |