PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY66166.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 413aa MW: 45804.3 Da PI: 4.972

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY66166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	66.8	4.4e-21	29	133	2	108
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfshlta 98 ++lLl+c a++s+d +laq++++ l++ as gdp+qRla+yf++AL +r +r ++ +++ ++ + + +++++l ++++ P+++f++ + TEY66166.1 29 EKLLLHCGSALESNDVTLAQQVMWVLNNVASAVGDPNQRLASYFLRALVSRASRVCPATMSFKAAGIPH----RRLMSVTELagYVDLIPWHRFGFCAS 123 689*************************************************888887655444444....33334444455*********** PP GRAS 99 NqaIleaveg 108 N+aIleav g TEY66166.1 124 NSAILEAVRG 133 *****987 PP
2	GRAS	136.6	2.6e-42	141	399	142	373
GRAS 142 lRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...........vakrledleleeL.....rvkpgEalaVnlvlqlhrlldesvsle 221 lRi +++ ++ + +ee+++rL +fA+ +vpfefnv+ +++++ d+ l +L +v+ +Eal+Vn++ l +l++e++s + TEY66166.1 141 LRISVLSWRPPTpplLNIPIEEIRQRLVNFARYRDVPFEFNVIevggpleeeeaASSSFYDFLLGQLgaaivKVNVDEALVVNIQNWLRYLPEEETSFS 239 566666554444445567789********************999999888765567777778888665556666************8877766 PP GRAS 222 s........erdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhet 311 + +rd++L+lv +lsP +v+vv++++d+ ++ ++ r++++++y++ fd+le+ lp+++ +ri +E +g +i+n+v eg +r+er e+ TEY66166.1 240 DsscdgtmsYRDSFLELVGRLSPCLVTVVDEDCDLgAHSGLASRIVSCFNYMWIPFDALETFLPKDNPQRIEYESD-IGHKIENIVGYEGGQRIERLES 337 5566666678*********************77889********************************.****************** PP GRAS 312 lekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373 ++ +r+ +aGF +vp++e+++k++k ll +++ ++g++ ++e+g lvl+Wk+++ v + aW TEY66166.1 338 GGRLCRRMASAGFMSVPFGEETVKEVKVLLDEHAsGWGMK-KDEEGMLVLTWKGHNAVYAGAW 399 ******************************444443.35578888************ PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MQNPSLFTNS RSSISGTVLT RCLDGACIEK LLLHCGSALE SNDVTLAQQV MWVLNNVASA 60 VGDPNQRLAS YFLRALVSRA SRVCPATMSF KAAGIPHRRL MSVTELAGYV DLIPWHRFGF 120 CASNSAILEA VRGAWGPLVE LRISVLSWRP PTPPLLNIPI EEIRQRLVNF ARYRDVPFEF 180 NVIEVGGPLE EEEAASSSFY DFLLGQLGAA IVKVNVDEAL VVNIQNWLRY LPEEETSFSD 240 SSCDGTMSYR DSFLELVGRL SPCLVTVVDE DCDLGAHSGL ASRIVSCFNY MWIPFDALET 300 FLPKDNPQRI EYESDIGHKI ENIVGYEGGQ RIERLESGGR LCRRMASAGF MSVPFGEETV 360 KEVKVLLDEH ASGWGMKKDE EGMLVLTWKG HNAVYAGAWV PRVPASHQNN LLV

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MQNPSLFTNS RSSISGTVLT RCLDGACIEK LLLHCGSALE SNDVTLAQQV MWVLNNVASA  60
VGDPNQRLAS YFLRALVSRA SRVCPATMSF KAAGIPHRRL MSVTELAGYV DLIPWHRFGF  120
CASNSAILEA VRGAWGPLVE LRISVLSWRP PTPPLLNIPI EEIRQRLVNF ARYRDVPFEF  180
NVIEVGGPLE EEEAASSSFY DFLLGQLGAA IVKVNVDEAL VVNIQNWLRY LPEEETSFSD  240
SSCDGTMSYR DSFLELVGRL SPCLVTVVDE DCDLGAHSGL ASRIVSCFNY MWIPFDALET  300
FLPKDNPQRI EYESDIGHKI ENIVGYEGGQ RIERLESGGR LCRRMASAGF MSVPFGEETV  360
KEVKVLLDEH ASGWGMKKDE EGMLVLTWKG HNAVYAGAWV PRVPASHQNN LLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49950.1	4e-96	GRAS family protein