PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64148.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 1225aa MW: 136789 Da PI: 8.9944

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.9	5.2e-17	698	729	1	32
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 Cs+C++tkTplWR+gp g+ktLCnaCG++yr+ TEY64148.1 698 CSHCQSTKTPLWREGPLGPKTLCNACGVRYRS 729 *******************************7 PP
2	GATA	57.9	1.4e-18	1144	1178	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C +tkTp+WR+gp g+ktLCnaCGl+yr +l TEY64148.1 1144 CVHCESTKTPQWREGPLGPKTLCNACGLRYRTGRL 1178 *******************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1225 aa Download sequence
MRCEIVPLML GFFLLLLVSV PVTVEASEAN DGYKQCEHTV KKWASFSADT EVSGNQHALR 60 DLLLFLHVPR TGGRTYYHCF LKKLYSSSLE CPRSYDKLRY NSRKSSCRLL STHDDYSVMS 120 KLPRERTSLM TILRDPIERV FSTYEFSLEV ASRFLIHPNL TSVLTMSRSA RRKTSGVNTL 180 DIWPWKYLVP WMREDLFSRR DIRKLRGQVN LVAGDPYDME DIAMPLHEYI NEPVTRDIVH 240 NGATFQIVGL TNNSYFTEAH EVRHCVLKYH SLGDYVLQVA KKKLDNMIYV GLTENHKESA 300 NMFANVVATQ VISKHKTSSS NSDGAGDNDS EQHSQLPDMK TDANDKDQNQ KNVSSTGEDN 360 AIQENLIVSA LFYQWTVGKL MKAYNSCVLK LRNSQADRRV NSLKQLYPAN FTKEARKRVP 420 EALIKEITLL NSLDVELYKY GQYIFGKQQE HMTQSMVHDC RFSDFDVANS GESNCVPVIS 480 RSMAEVGNSL GPDEDFDVLL NILDFPVECL EGDEVAAEWD SSKAQFLGPI PSSLLMEPPL 540 MSNPNSSPQP RSHIDAAPEL KQLANHVDTC SLHIPRLRKF TKVQESRSFC TQSPVSVLES 600 NDSCSREKCL STKPEHAIPA QSRSKRVRYS GVNPWLSAAH ELSTSKRTSR WKRLIQHPVS 660 IDLMRKSDEN VDNLIIVQNL PQSHEVASKP CDALVKKCSH CQSTKTPLWR EGPLGPKTLC 720 NACGVRYRSG CLFPEYRPAA SPTFVPSQHS NSYMKVAEMR SAAKLMEVKI KVAPLSPPHT 780 EAKIDEPPKA PQLEANILEL PNSHMKVEEM RTAAKLMEVE TGAPLSPQTG ANFDEPPKAP 840 QLEAKLLELP NSHVKVAEMR SAAKLMEVKI KIVGTSEKKQ PTKHVKQMQL AKHVDTSSSL 900 QIAGAPKRMQ LAEHVDTSSS LQIAVVPEKK LLAKDDDTSS SFQIAGAPKR MQLAEHVDTS 960 SSLQIAVVPK RKLLPKDDDT SSSLQIAGAP KQKLLAKHDD TYSSHIPLQN KSTKVQESGA 1020 FCTQSRVSLL QDSGYLRYRL KYVEPGGVDP TNSMSGKKSR KVPVAVGVSK NLPQTHDTSL 1080 HGSDPAPLQK ASNSMKGKKS RKRLLQLPVS VDVVKNSPKN EASSLDISDP ASLNPSCPAV 1140 VEKCVHCEST KTPQWREGPL GPKTLCNACG LRYRTGRLLP EYRPAASPTF MPSLNSNSHR 1200 KVVRMRIEAM HSKMEISRTV HEDEG

Sequence ? help Back to Top

Protein Sequence Length: 1225 aa Download sequence

MRCEIVPLML GFFLLLLVSV PVTVEASEAN DGYKQCEHTV KKWASFSADT EVSGNQHALR  60
DLLLFLHVPR TGGRTYYHCF LKKLYSSSLE CPRSYDKLRY NSRKSSCRLL STHDDYSVMS  120
KLPRERTSLM TILRDPIERV FSTYEFSLEV ASRFLIHPNL TSVLTMSRSA RRKTSGVNTL  180
DIWPWKYLVP WMREDLFSRR DIRKLRGQVN LVAGDPYDME DIAMPLHEYI NEPVTRDIVH  240
NGATFQIVGL TNNSYFTEAH EVRHCVLKYH SLGDYVLQVA KKKLDNMIYV GLTENHKESA  300
NMFANVVATQ VISKHKTSSS NSDGAGDNDS EQHSQLPDMK TDANDKDQNQ KNVSSTGEDN  360
AIQENLIVSA LFYQWTVGKL MKAYNSCVLK LRNSQADRRV NSLKQLYPAN FTKEARKRVP  420
EALIKEITLL NSLDVELYKY GQYIFGKQQE HMTQSMVHDC RFSDFDVANS GESNCVPVIS  480
RSMAEVGNSL GPDEDFDVLL NILDFPVECL EGDEVAAEWD SSKAQFLGPI PSSLLMEPPL  540
MSNPNSSPQP RSHIDAAPEL KQLANHVDTC SLHIPRLRKF TKVQESRSFC TQSPVSVLES  600
NDSCSREKCL STKPEHAIPA QSRSKRVRYS GVNPWLSAAH ELSTSKRTSR WKRLIQHPVS  660
IDLMRKSDEN VDNLIIVQNL PQSHEVASKP CDALVKKCSH CQSTKTPLWR EGPLGPKTLC  720
NACGVRYRSG CLFPEYRPAA SPTFVPSQHS NSYMKVAEMR SAAKLMEVKI KVAPLSPPHT  780
EAKIDEPPKA PQLEANILEL PNSHMKVEEM RTAAKLMEVE TGAPLSPQTG ANFDEPPKAP  840
QLEAKLLELP NSHVKVAEMR SAAKLMEVKI KIVGTSEKKQ PTKHVKQMQL AKHVDTSSSL  900
QIAGAPKRMQ LAEHVDTSSS LQIAVVPEKK LLAKDDDTSS SFQIAGAPKR MQLAEHVDTS  960
SSLQIAVVPK RKLLPKDDDT SSSLQIAGAP KQKLLAKHDD TYSSHIPLQN KSTKVQESGA  1020
FCTQSRVSLL QDSGYLRYRL KYVEPGGVDP TNSMSGKKSR KVPVAVGVSK NLPQTHDTSL  1080
HGSDPAPLQK ASNSMKGKKS RKRLLQLPVS VDVVKNSPKN EASSLDISDP ASLNPSCPAV  1140
VEKCVHCEST KTPQWREGPL GPKTLCNACG LRYRTGRLLP EYRPAASPTF MPSLNSNSHR  1200
KVVRMRIEAM HSKMEISRTV HEDEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08010.2	1e-33	GATA family protein