PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY63971.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | YABBY | ||||||||
Protein Properties | Length: 116aa MW: 12793.7 Da PI: 8.2086 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 88.1 | 2.3e-27 | 2 | 92 | 2 | 91 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshl.deslkeelleelkveeenlksnvekees 91 + + sse+vCyvqCnfCntilav+vP + +++vvtvrCGhC++llsv++ q + ++ ++s+ e ++e + +++ + n+ ++ TEY63971.1 2 SFDMSSERVCYVQCNFCNTILAVNVPGSNMLNVVTVRCGHCANLLSVSMGGLLQSVYLQDFQkQQSMGEAAVKESVNIGSSSTYNTNRYGP 92 56789******************************************99998877766663202333333333333333333333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MSFDMSSERV CYVQCNFCNT ILAVNVPGSN MLNVVTVRCG HCANLLSVSM GGLLQSVYLQ 60 DFQKQQSMGE AAVKESVNIG SSSTYNTNRY GPLQTQHEVQ PKMPPIRRNV LLSFSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-23 | YABBY family protein |