PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY63490.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 275aa MW: 30987.2 Da PI: 4.4342

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY63490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.4e-19	45	98	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k TEY63490.1 45 KKRRLSVDQVKALEKNFEVDNKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 98 566899***********************************************9 PP
2	HD-ZIP_I/II	125.5	2.4e-40	44	136	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe ++kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk+++dal+++ ++L +e+e+ ++++e TEY63490.1 44 EKKRRLSVDQVKALEKNFEVDNKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKASHDALNRKYQSLLRENESFINQIRE 136 69***********************************************************************************99999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MKRLGSSEMS MCPNSTVDVD EHNHHGLYTT ELEGMEEESG RISEKKRRLS VDQVKALEKN 60 FEVDNKLEPE RKVKLAQELG LQPRQVAVWF QNRRARWKTK QLERDYGLLK ASHDALNRKY 120 QSLLRENESF INQIREMKSE LNGSQSEGKI ALLEEKCDLE IDCGGGAAAE LNFENCENEM 180 IGAVFADVKD GSDSDSSAIV NDDNNSNSPI AAAISSSGGV PHRFGLTEAS VVGDPNETQF 240 VKIEEYNFFG EESCSDLFCE DQPPTLHWYG NEEWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	74	KKRRLSVDQVKALEKNFEVDNKLEPERKVK
2	93	101	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	1e-59	HD-ZIP family protein