PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY62990.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 323aa MW: 35535 Da PI: 5.4684

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY62990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.2e-07	11	50	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ ++ fC+ + +lC C ++H+ H TEY62990.1 11 KLCDSCKASPAAVFCRAESAFLCGACDAKIHSAnklasrH 50 68*****************************654555555 PP
2	zf-B_box	30.2	9.5e-10	53	97	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ ++ + C+ + lC++C +H+ H++vp TEY62990.1 53 VWICEVCEQAPAAFTCKADAAVLCATCDRDIHSAnplarrHERVP 97 689*****************************6689999999987 PP
3	CCT	70.2	5.3e-24	259	303	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++e TEY62990.1 259 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSE 303 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGVESWSITA KLCDSCKASP AAVFCRAESA FLCGACDAKI HSANKLASRH GRVWICEVCE 60 QAPAAFTCKA DAAVLCATCD RDIHSANPLA RRHERVPFVP FYDAITKSTP SAECSEEEAE 120 AASWLLPDPN TKAEDQSGSP EYMSAEYLFT DIDPYLDLDL KSGDQKPHLH QIDEQKHYSS 180 DGVVPVQNES GQYVPGPVVD GFPTFEMDYA VPKPFMYNFT SQSIIQSVSS SSSMEVGVVP 240 DAAESLGKSE SVAVLGMDRE ARVLRYREKR KNRKFEKTIR YASRKAYAET RPRIKGRFAK 300 RSELEVESLL GGDAASYGVV PSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	3e-92	CO-like family protein