PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY62891.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 687aa    MW: 77102.8 Da    PI: 6.6485
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY62891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.71.2e-24131232199
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+kvlt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g++W++k+i+r++++r++lt+GW+ Fv ++++ +gD++vF   + +++el+v
  TEY62891.1 131 FCKVLTASDTSTHGGFSVLRKHANEClppldMNQQTPTQELIAKDLHGNEWQFKHIFRGQPRRHLLTTGWSTFVTSKRIVTGDSFVFL--RGETGELRV 227
                 99****************************9555555679************************************************..449999*** PP

                 EEE-S CS
          B3  95 kvfrk 99 
                 +v+r+
  TEY62891.1 228 GVRRH 232
                 ***97 PP
2Auxin_resp103.13.6e-34257336183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F v+Y+Pr+  s+F++ ++k+++a+++ + +GmRfkm+fe++ds+err+sGt+vgv+d++p +W++SkWr Lk
  TEY62891.1 257 ASHAVMTQTIFVVYYKPRT--SQFIIGLNKYLEAINHDFGIGMRFKMRFEGDDSPERRFSGTIVGVEDMSP-HWNDSKWRTLK 336
                 689***************6..9*************************************************.********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
MANWCSVSQQ QQHGFSAEGV SVKDALYEEL WRGCAGPLVD VPKSGERVYY FPQGHMEQLE  60
ASTNQELNQR IPMFNLPPKI LCRVFNIQLL AEKDTDEVYA QITLMPESDQ SEPRSPDSPI  120
DEPPRPAVHS FCKVLTASDT STHGGFSVLR KHANECLPPL DMNQQTPTQE LIAKDLHGNE  180
WQFKHIFRGQ PRRHLLTTGW STFVTSKRIV TGDSFVFLRG ETGELRVGVR RHARQQLSIP  240
SSVISSQSMH LGVLATASHA VMTQTIFVVY YKPRTSQFII GLNKYLEAIN HDFGIGMRFK  300
MRFEGDDSPE RRFSGTIVGV EDMSPHWNDS KWRTLKVQWD EPASIPRPER VSPWEIEPFV  360
ASIPPTLVQP PTMKNKRLRP HIEIAVPETI SSSASPTWNL AHDGHQVNHS FEGQRSSCIT  420
NSHTKQTDAG VTPMKHRNDG ASTTHTDMGW KPPVHVHAEE TEESKSASVW SVISNHSAPN  480
SGRQFSSPTT GCTDVRKPDA LASCRLFGFD LKRPSVAPSR LADIPKDNSE LHISSALSSA  540
DLEQKSSVSK EFRDLRQDQL QVPTKEVQSR QSNSSRSRTK VQMQGVAVGR AVDLTTLNGY  600
DNLITELEEM FEIKGELQSR NKWEIVFTDD EGDMMLVGDD PWPEFCNMVR RIFICSSQDV  660
KKMKANKLPL SATECEGTGF SLENIGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein