PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY62018.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 686aa    MW: 76829.4 Da    PI: 6.5447
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY62018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.6e-24130230198
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+kvlt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g++W++k+i+r++++r++lt+GW+ Fv ++++ +gD++vF   + +++el+v
  TEY62018.1 130 FCKVLTASDTSTHGGFSVLRKHANEClppldMSQQTPTQELIAKDLHGNEWQFKHIFRGQPRRHLLTTGWSTFVTSKRIVAGDSFVFL--RGETGELRV 226
                 99*****************************555556679************************************************..449999*** PP

                 EEE- CS
          B3  95 kvfr 98 
                 +v+ 
  TEY62018.1 227 GVRH 230
                 *986 PP
2Auxin_resp103.92e-34256335183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F v+Y+Pr+  s+F+v ++k+++a+++ + vGmRfkm+fe++ds+err+sGt+vgv+d++p +W++SkWr Lk
  TEY62018.1 256 ASHAVMTQTIFVVYYKPRT--SQFIVGLNKYLEAINHDFGVGMRFKMRFEGDDSPERRFSGTIVGVEDMSP-HWNDSKWRTLK 335
                 689***************6..9*************************************************.********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    
MANWGSVSQQ QHGFSAEGVS VKDALYEELW RGCAGPLVDV PKSGERVYYF PQGHMEQLEA  60
STNQELNQRI PMFNLPPKIL CRVFNIQLLA EKDTDEVYAQ ITLMPESDQS EPRSPDSPID  120
EPPRPAVHSF CKVLTASDTS THGGFSVLRK HANECLPPLD MSQQTPTQEL IAKDLHGNEW  180
QFKHIFRGQP RRHLLTTGWS TFVTSKRIVA GDSFVFLRGE TGELRVGVRH HARQQISIPS  240
SVISSQSMHL GVLATASHAV MTQTIFVVYY KPRTSQFIVG LNKYLEAINH DFGVGMRFKM  300
RFEGDDSPER RFSGTIVGVE DMSPHWNDSK WRTLKVQWDE PASIPRPERV SPWEIEPFVA  360
SIPPSLVQPP TMKNKRLRPH IEIAVPETIT STASPTWNLA HDGHQINHSF EGQRSSYITN  420
SHTKQTDAGV TPMKHRNDGA STTHMDGGWK PPVHVHAEET EESKSASVWS VISNHSAPNS  480
GRQFSSLTTG CTDVRKPDAL ASCRLFGFDL KRPSIAPSRL GDIPKDNSEL HIPSALSSAD  540
SEQKSSGSKE FRDLWQDQLQ VPTKEVQSRQ SNSSRSRTKV QMQGVAVGRA VDLTTLNGYD  600
NLITELEEMF EIKGELQSRN KWEIVFTDDE GDMMLVGDDP WPEFCSMVRR IFICSSQDVK  660
KMKANKLPLS ATECEGTGFS LENIGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein