PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY61932.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 593aa MW: 62647.6 Da PI: 5.9698

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY61932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	205	250	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 r +WT e+d +l v+ +G ++W+ Iar+ + Rt+ ++ +rw+ TEY61932.1 205 RRSWTLEDDAKLTASVQNHGERNWENIARCDFkNDRTASELSHRWY 250 678************************96668*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MVDKSKGNKS TISEDDMSAV LQRYSLNTVL ALLQEVDQAA AGVKINWRDV VKNSATGISG 60 AREYQMLWRH LTYGEPLIDH LDNDSEPLDD DSDLEHEVEP LPAVGREASV EAAACVNVLI 120 ASGYPNNSQL PNNSTIEAPL TINVPNTKAV CASSDDSHLS DIIRGTKNVT ISVSVQKQPL 180 SSGVSGEKRP NNEVAEVNPP SRKRRRSWTL EDDAKLTASV QNHGERNWEN IARCDFKNDR 240 TASELSHRWY ILRKKQGNTK GGTSSQPPET QLAAAHRAMN LAIDRPMSDN LKSVSHKAAA 300 GIKVQHQPPK ASASPADQPF PRVGPSKPQM LASRPSVNPI SDTDSMIKAA AVAAGARIAT 360 PTDASSLIEA ARSQNVVHIT TGSIGHQLPS NVHFIRNGLA KAPISTYSAP KPNILETGEG 420 KPAQSRSTKP AASAALSPTG AVPVSNAISV KESAAVPALP NPSAKLPVTA VDVVISTSGN 480 EKKELGKSNQ RADQAGVSGC LPVEQEPEVV GNSQPSSSGN ALQENIWGDK ASVSVSDPVS 540 QATDDGIALP SLEVEQGKTN IDSQLTSEVT AENTSINETS EDLPSTSKNG AAI

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MVDKSKGNKS TISEDDMSAV LQRYSLNTVL ALLQEVDQAA AGVKINWRDV VKNSATGISG  60
AREYQMLWRH LTYGEPLIDH LDNDSEPLDD DSDLEHEVEP LPAVGREASV EAAACVNVLI  120
ASGYPNNSQL PNNSTIEAPL TINVPNTKAV CASSDDSHLS DIIRGTKNVT ISVSVQKQPL  180
SSGVSGEKRP NNEVAEVNPP SRKRRRSWTL EDDAKLTASV QNHGERNWEN IARCDFKNDR  240
TASELSHRWY ILRKKQGNTK GGTSSQPPET QLAAAHRAMN LAIDRPMSDN LKSVSHKAAA  300
GIKVQHQPPK ASASPADQPF PRVGPSKPQM LASRPSVNPI SDTDSMIKAA AVAAGARIAT  360
PTDASSLIEA ARSQNVVHIT TGSIGHQLPS NVHFIRNGLA KAPISTYSAP KPNILETGEG  420
KPAQSRSTKP AASAALSPTG AVPVSNAISV KESAAVPALP NPSAKLPVTA VDVVISTSGN  480
EKKELGKSNQ RADQAGVSGC LPVEQEPEVV GNSQPSSSGN ALQENIWGDK ASVSVSDPVS  540
QATDDGIALP SLEVEQGKTN IDSQLTSEVT AENTSINETS EDLPSTSKNG AAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	206	RKRRR
2	202	207	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	2e-48	MYB_related family protein