PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY61788.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 377aa    MW: 42176.5 Da    PI: 7.2263
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY61788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.53.6e-06153174426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f+r G C++Gd C  aHg
  TEY61788.1 153 SACPDFRR-GACRRGDACEHAHG 174
                 67******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MQIHGNHDSA TPETEVHLHF SLNKMMMMMI SDPPRTNPTV QIPNWDPYLD DPNPTPHIHS  60
PAIHADVSQY DVALAALQRY LPSNKEDFAA ADPEDDDFDI PVDAYSCDEF RMYEFKVKRC  120
ARARSHDWTE CPFAHPGEKA RRRDPRVHHY SGSACPDFRR GACRRGDACE HAHGVFECWL  180
HPARYRTQPC KDGTHCRRRV CFFAHMPEQL RILPYAADES PRSAPIGSSP RYSPPSSPPQ  240
SPMSQLTESI RGMQINNKMK SGLGRGMGMN LGMGMSMSPP SWGGGYGSPC SPSKIRPGFR  300
SLPATPIRAM ARPGINAFDL WESSCEEEPA MERVESGRAL RERIYSKLGQ ENSLNRVGHG  360
DSAGSVPDIG WVSELCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.16e-92C3H family protein