PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY60499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 489aa MW: 55095.3 Da PI: 4.9432 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 38.1 | 2.5e-12 | 147 | 170 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 e C++++++G Ck+G +CkF+H+p TEY60499.1 147 EDCSYYMKFGSCKFGLNCKFNHPP 170 89********************97 PP | |||||||
2 | zf-CCCH | 22.5 | 2e-07 | 193 | 216 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 + +C++++ + CkyG Ck++Hg TEY60499.1 193 QTECKYYLTSAGCKYGKDCKYSHG 216 679********************8 PP | |||||||
3 | zf-CCCH | 39 | 1.4e-12 | 239 | 263 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C++++rtG CkyG +C+F+H++ TEY60499.1 239 EKECPYYMRTGSCKYGLNCRFHHPE 263 679********************96 PP | |||||||
4 | zf-CCCH | 34.2 | 4.2e-11 | 405 | 431 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C+ff++tG Ck+ ++CkF+H++ TEY60499.1 405 PGEPECSFFLKTGDCKFRSNCKFNHPK 431 5799*********************96 PP | |||||||
5 | zf-CCCH | 28.6 | 2.4e-09 | 454 | 478 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++++C +++r+G+CkyG+ Ck+ H+ TEY60499.1 454 DQPICTHYHRYGICKYGPGCKYDHP 478 689*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 489 aa Download sequence |
MAESSSSSTS EKPPIEKVGL GFLLQDTPPI KPAIHQPEIA PYEGSDTPTS VVSLDEETEF 60 RNAIERDLCE LTIQQAHIES IDEENSDDVG TQKDSESLED ENEIDEGDED KEVNEAINYS 120 DGASKLGRYN QNNSRRRVNY PMRPDAEDCS YYMKFGSCKF GLNCKFNHPP RRKNQNVKER 180 ANYREENSER GGQTECKYYL TSAGCKYGKD CKYSHGSDRS SAGPMPEFNF LGLPIRIGEK 240 ECPYYMRTGS CKYGLNCRFH HPEPVTVGGD STSGYVNGGS FPSQFVYSSS PTSWSSPRSF 300 NETSPFVPAM FPPSQGAPTS NQDWNGYQIL FSDMMMSTYY FCLNSLLCCL ICFLFLFDLF 360 EAATYSASEG LPTPPAFAMN NLPAEINFPM HRQPDILIEE YPERPGEPEC SFFLKTGDCK 420 FRSNCKFNHP KNRGFKGKPN TYTLSDKGLP LRPDQPICTH YHRYGICKYG PGCKYDHPSN 480 YAILPTDPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63260.1 | 1e-102 | C3H family protein |