PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY60470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 220aa MW: 24229.1 Da PI: 5.9382 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.4 | 8e-16 | 20 | 80 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ TEY60470.1 20 RSRWTPKPEQILILETIFNSgMVNPPKDETVRIRKLLekfgSVADANVFYWFQNRRSRSRR 80 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107 | 1.2e-34 | 19 | 82 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G + d+NVfyWFQNr++R+r++q TEY60470.1 19 VRSRWTPKPEQILILETIFNSGMVNPPKDETVRIRKLLEKFGSVADANVFYWFQNRRSRSRRRQ 82 589***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 220 aa Download sequence |
MEDATGSRQQ QGEAAEQPVR SRWTPKPEQI LILETIFNSG MVNPPKDETV RIRKLLEKFG 60 SVADANVFYW FQNRRSRSRR RQRQVQASLT AADHPSGIHY DHTFSPNSLS YTMPNPGSSS 120 SFGHNSGGFS GYPGLMQEFE QNPVFCEAEV QSLAGGGAEM MTVFVNGVAT EVGRGPVDVK 180 AMFGGDLVVY HSSGLAVEMN EYGILMQGLQ HGESYFLVIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G03660.1 | 8e-34 | WOX family protein |