PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY60028.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 292aa MW: 32244.9 Da PI: 5.2861

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY60028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.3	1.1e-17	135	189	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++keq Lee F+++++++ +++ LAk+l+L+ rqV vWFqNrRa+ k TEY60028.1 135 RRKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLKARQVEVWFQNRRARTK 189 567789***********************************************98 PP
2	HD-ZIP_I/II	124.4	5.3e-40	135	225	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++k+rlskeq+++LEesF+e+++L+p++K +la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk TEY60028.1 135 RRKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLKARQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 225 59*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MELGLSLGDA SKSLGFLKDN NSSTNQDLTK PTGFDFCMSL GLSSKENGED DDTSAEDGSD 60 DNQEETPLQL NLLPLAPLPL PRLWSSDNGS SENGSSGKGL DVNRTPAAEE ASSANKREFD 120 AAGNDNDDDN ALNTRRKLRL SKEQSAFLEE SFKEHSTLNP KQKLALAKQL NLKARQVEVW 180 FQNRRARTKL KQTEVDCEYL KRCCETLTEE NRRLHKELQE LRALKTSNPF YMQLPATTLT 240 MCPSCERVAS TTAAAPAAVK ADSNIPKAIP FPLARPRFYP FPQAHPNQPA AS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	192	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	5e-58	HD-ZIP family protein