PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY59985.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 267aa    MW: 30048.5 Da    PI: 9.0748
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY59985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.61.1e-151153345
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                i n+s r+ ++ kR++g++KK +ELS LC++++ vii+s+  +
  TEY59985.1 11 ITNDSERKASYKKRKKGLIKKVSELSSLCGVQAYVIIYSPYET 53
                89*************************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MTRKKVTLAY ITNDSERKAS YKKRKKGLIK KVSELSSLCG VQAYVIIYSP YETVPVVWPS  60
PLDAQSILAR FRKLSIMDQS RKMVNQESFT RQRIKKVTEP LRRLQKDNTC RELEAFMFRC  120
ILGQASLDDL QIHDATEMSF VISQTLRDIK ARMDAMVAEH QRNQTAPPML PPLLPPPPPM  180
LALPPPPPAV EEAPPRMEDD GMESFPWNLV QSPGGGGEMD RTGLGWDPGM VLPYPYIFDQ  240
SNSSQSGQNP NPNPSPNPNP NPNSFNQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVTLAYITNDSERKASYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-45M-type_MADS family protein