PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY59062.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 867aa    MW: 96771.5 Da    PI: 5.8976
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY59062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.79.4e-23144245199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  TEY59062.1 144 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGQEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 239
                 99*****************************7333.34459************************************************..44999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                  +v+r+
  TEY59062.1 240 AGVRRA 245
                 999985 PP
2Auxin_resp120.81.1e-39270352183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg +d+dp rW++SkWr+Lk
  TEY59062.1 270 AWHAIQTNTMFTVYYKPRTSPAEFIVPYDQYMESIKKNYSIGMRFKMRFEGEEAPEQRFTGTIVGSEDADPNRWKDSKWRCLK 352
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    
MGSPEVLMKG FNDVGGGDPA PGNMNSDAGR AVDAERALYT ELWKACAGPL VTVPRENELV  60
FYFPQGHIEQ VEASTNQSSD QQMPVYNLPP KILCRVVNVL LKAEADTDEV FAQITLMPEA  120
NQDENAERKN SPPSPPPHVR VYSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP  180
TQELVAKDLH GQEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRA  240
GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAIQTNTMF TVYYKPRTSP AEFIVPYDQY  300
MESIKKNYSI GMRFKMRFEG EEAPEQRFTG TIVGSEDADP NRWKDSKWRC LKVRWDETSA  360
IVRPERVSPW KIEHTLSPPV LNPVPVPRPK KPRSSVLPSV LIREGPTKMT ADPAPANHGF  420
PRVLQGQESS TLRGPFSETN ELDSSEQSYL WKPSLEDEKI DVSASRRYGA DNWSPLGRPE  480
SSFTDLLSGF GSKTNAHRDF SMPLGNQSNP KRQTQECDAK FSLMGNIWSL MPSGLSLNLM  540
DSSIKNHVQG TDTSYLARGD SRHGAFRDFS MINDPRGDNQ GSNWSMPPPV STYLHMRTSQ  600
PKELMPKPVC AEQHDTMKQK EGNCKLFGIP LISESAPSDP EISNRNVLNS PGFTQNSGHF  660
HQFPAFEFDQ RSDQSKGLKA GDHGVSAGQQ VNQFPSFPPS ATERETKGHS GSSRSCTKVQ  720
KQGSALGRSV DLAKFNNYDE LISELDDLFE FGGELKARNK NWLVVYTDDE DDMMLVGDDP  780
WGEFCCMVRK LLILTKEEML RMNPGTLNSN GEDTSSIADG VDANVQSFPS LSQDDYYICD  840
ASTCVEAWSD CIIHLTVESW ETLNGEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein