PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY59061.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 841aa    MW: 93843.3 Da    PI: 6.328
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY59061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.79e-23144245199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  TEY59061.1 144 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGQEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 239
                 99*****************************7333.34459************************************************..44999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                  +v+r+
  TEY59061.1 240 AGVRRA 245
                 999985 PP
2Auxin_resp119.82.1e-39270352183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t+++F+v+Y+Pr+s++eF+v+++++++++k+++++GmRfkm+fe+e+++e+r++Gt+vg +d+dp rW++SkWr+Lk
  TEY59061.1 270 AWHAIQTNTMFTVYYKPRTSPAEFIVPYDQYMESIKKNYAIGMRFKMRFEGEEAPEQRFTGTIVGSEDADPNRWKDSKWRCLK 352
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    
MDSPEVLMKG FNEVGGGDPS PGNMNSDAGR AVDAERALYT ELWKACAGPL VTMPRENELV  60
FYFPQGHIEQ VEASTNQSSD QQMPVYNLPP KILCRVVNVL LKAEADTDEV FAQITLMPEA  120
NQDENAERKD PPPSPPPHVR VYSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP  180
TQELVAKDLH GQEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRA  240
GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAIQTNTMF TVYYKPRTSP AEFIVPYDQY  300
MESIKKNYAI GMRFKMRFEG EEAPEQRFTG TIVGSEDADP NRWKDSKWRC LKVRWDETSA  360
IVRPERVSPW KIEHTLSPPV LNPVPVPRPK RPRSSVLPSS SETSVLTREG PTKMTADPAP  420
ANHGFPRVLQ GQESSTLRGP LSESIELDSS EKSYLWKPSL EDEKIDVCAS RTYRADNWSP  480
LGRPESSFTD LLSGFGSKTN AHRDFSMPLG NQSIPKRQTQ ECDAKFSLMG NIWSLKPSGL  540
SLNLMDSSTK NHVQGTDTSY LARGDSRHGA FRDFSIINDP RGDNQGSNWS MPPPVSTYLH  600
MRTSQPKELM PKPVFAEQHD TVKQKEGGCK LFGIPLISKS APSEPEISNR NVLNSPGFTQ  660
NYGHSHQFPA FEFDQRSDQS KGLKVGDHGV AAGEQENQFP SFPPSATERE TKGHPGSSRS  720
CTKVQKQGSA LGRSVDLAKF NNYDELISEL DDLFEFGGEL KARNKNWLVV YTDDEDDMML  780
VGDDPWGEFC CMVRKLLILT KEEMLRMNPG TLNSKGEDTS SIADGVDANV QSFPSPGPDD  840
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein