PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY58187.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family RAV
Protein Properties Length: 316aa    MW: 35707.2 Da    PI: 8.7955
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY58187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.8e-092875255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++kGV    ++g W A+I+       + +r++lg+f ++  Aa a++ a+ kl+ 
  TEY58187.1 28 RFKGVV-PQQTGHWGAQIYA------NhQRIWLGTFKSEALAAMAYDSAATKLRS 75
                578996.6679******999......44**********99***********9985 PP
2B390.91e-28165253187
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 f+k+ltpsdv+k++rlv+pk++a ++  g ++ee+++l ++d+  r W+++++y+k+s+++v+t+GW++Fvk +gL+++D+v F+l ++
  TEY58187.1 165 FQKELTPSDVGKLNRLVIPKRYAVKYfpGVPEEEQVQLEFYDRGMRLWKFRYCYWKSSQSFVFTRGWNRFVKTKGLRSNDSVAFYLYES 253
                 99**************************99999****************************************************6543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MISQTKRGEE SSESTNFPGS KRPRSTERFK GVVPQQTGHW GAQIYANHQR IWLGTFKSEA  60
LAAMAYDSAA TKLRSRDSHR NFPPTGLTPL ELKFQSGLST DSVLNMIRDG SYTAKFSDFL  120
ASQKKQGDEK LGLGLGFGFE LGLGLGLGFD SSINDKEDFS STLLFQKELT PSDVGKLNRL  180
VIPKRYAVKY FPGVPEEEQV QLEFYDRGMR LWKFRYCYWK SSQSFVFTRG WNRFVKTKGL  240
RSNDSVAFYL YESRKAGQRS GKRFIVIDVA EKDEDFGEVV EEEAECCEES LVCSSPSSSG  300
TKVSFRLFGI EISNYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.14e-85RAV family protein