PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56886.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 510aa MW: 55678 Da PI: 7.8599

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.9	1.3e-18	127	213	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++++ +l+rg+l++ +Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ +s ++p+f+q+e TEY56886.1 127 EWSDTAISCLLEAYSDKFVQLNRGNLRGRDWEEVAAMVseRCENQSKSVEQCKNKVDNLKKRYKLERHRLSNGGVLTS-HWPWFTQME 213 5***********************************666677899*********************966665.9*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MGPLTCPPNG LVTNVTPAKF LKFHDPLTAP RFHFRLRFRQ LTPSMAACDD DFSLLDDPQN 60 PNSAPPSTAT ASPYQINPYE HDSDPFDSDP NSLSTKRLTD RDDIHSGTSK RTRLPSSAGD 120 YRKDREEWSD TAISCLLEAY SDKFVQLNRG NLRGRDWEEV AAMVSERCEN QSKSVEQCKN 180 KVDNLKKRYK LERHRLSNGG VLTSHWPWFT QMEQIVGNSI AAKAAVEEEK SSGAGGVSYS 240 TRQTKRLGTI VNCSGSQINS MKLKPSNNLR WRRVVLKISG AALAGSAPNN IEPKVAMLIA 300 TEVSIACHVG VQVAIVVGGG NFFCGDAWVE QTGLDRCTAY QIGMMATVMN SVLLQSALEK 360 LGVQTRVQSA FSIPEVAEPY SRQRAIRHLE KGRVVIFGGI GAGTGNPLFS TDTAAALRAS 420 EIHADAVLKG TNMEGVYVCD ARNNSIAAEH ISFRELASRR ASPMDMMAVT FCEENGIPVG 480 IFNLHEPGNI SRALCGERVG TLIDQTGPVT

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MGPLTCPPNG LVTNVTPAKF LKFHDPLTAP RFHFRLRFRQ LTPSMAACDD DFSLLDDPQN  60
PNSAPPSTAT ASPYQINPYE HDSDPFDSDP NSLSTKRLTD RDDIHSGTSK RTRLPSSAGD  120
YRKDREEWSD TAISCLLEAY SDKFVQLNRG NLRGRDWEEV AAMVSERCEN QSKSVEQCKN  180
KVDNLKKRYK LERHRLSNGG VLTSHWPWFT QMEQIVGNSI AAKAAVEEEK SSGAGGVSYS  240
TRQTKRLGTI VNCSGSQINS MKLKPSNNLR WRRVVLKISG AALAGSAPNN IEPKVAMLIA  300
TEVSIACHVG VQVAIVVGGG NFFCGDAWVE QTGLDRCTAY QIGMMATVMN SVLLQSALEK  360
LGVQTRVQSA FSIPEVAEPY SRQRAIRHLE KGRVVIFGGI GAGTGNPLFS TDTAAALRAS  420
EIHADAVLKG TNMEGVYVCD ARNNSIAAEH ISFRELASRR ASPMDMMAVT FCEENGIPVG  480
IFNLHEPGNI SRALCGERVG TLIDQTGPVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein