PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56879.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 396aa MW: 45169.5 Da PI: 7.9589

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90.6	1.7e-28	76	161	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k plW+evs+ m +e g++rs+k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea TEY56879.1 76 RWPRQETLTLLEIRSRLDPKFKKANQKTPLWDEVSRIMsQEYGYQRSSKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 161 8***********************************8899************************98..55667*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MEDQYGTGDL RHFIDGRPHF PAISQPLDFP SCHRSSYPYD MLIFRQSDSS GIAPSAEGGA 60 ALISFDGGIA SGGAGRWPRQ ETLTLLEIRS RLDPKFKKAN QKTPLWDEVS RIMSQEYGYQ 120 RSSKKCREKF ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE ALYGTNNNSS SASHFHCNFP 180 SSNNDQEPYP LSKISDSSLP DSCDCDASSS QCTDSNAEEA RMKKRRGKMR RSLKAEIEAS 240 IEAQMRSMME KQEAWMEKMA RAIDGKEQER HVREEQWRRQ DAARIDGEHK MWAKEKAWIE 300 ARDATLMEAF NKLAAPESQV TRLIPAEEMA LDEIAGGLMC REKWDHVIND YLIKCSKKKK 360 EGNNAYDSIS NHGNGADAAA NDGLFRCFIG DSYQRL

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MEDQYGTGDL RHFIDGRPHF PAISQPLDFP SCHRSSYPYD MLIFRQSDSS GIAPSAEGGA  60
ALISFDGGIA SGGAGRWPRQ ETLTLLEIRS RLDPKFKKAN QKTPLWDEVS RIMSQEYGYQ  120
RSSKKCREKF ENLYKYYKKT KEGKAGRQDG KHYRFFRQLE ALYGTNNNSS SASHFHCNFP  180
SSNNDQEPYP LSKISDSSLP DSCDCDASSS QCTDSNAEEA RMKKRRGKMR RSLKAEIEAS  240
IEAQMRSMME KQEAWMEKMA RAIDGKEQER HVREEQWRRQ DAARIDGEHK MWAKEKAWIE  300
ARDATLMEAF NKLAAPESQV TRLIPAEEMA LDEIAGGLMC REKWDHVIND YLIKCSKKKK  360
EGNNAYDSIS NHGNGADAAA NDGLFRCFIG DSYQRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	229	MKKRRGKM
2	223	228	KKRRGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	3e-77	Trihelix family protein