PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY56716.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MYB
Protein Properties Length: 285aa    MW: 30561 Da    PI: 7.3008
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY56716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.7e-091054345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d ++ +a++ +G +   +W++Ia+ +  g++ +++ +++ 
       TEY56716.1 10 VWSREQDIQFEKAIASYGEEcpdRWEKIAAAVA-GKSVEEVMHHYE 54
                     7******************9*************.**********96 PP
2Myb_DNA-binding42.12e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
       TEY56716.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MPAEESSSSV WSREQDIQFE KAIASYGEEC PDRWEKIAAA VAGKSVEEVM HHYELLVDDV  60
NGIEAGFVEV PCYNSSSDGS AGHAGDEATT KKGGYSGNSN SDTNRGSKSS KLDQERRKGI  120
AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS  180
IHDITSVSCG NVSEPQVPIT GQTNGGGSSG KPNKSLPQSP VAATGVSMYG SPTMGQPIGG  240
PIVSAVGTPV NLPPPPHLAY PVHGSVVPGA PLNMAPVSYP VQRHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-108MYB family protein