PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56674.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 230aa MW: 25034.9 Da PI: 6.3953

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H TEY56674.1 82 FSCNYCRRKFYSSQALGGHQNAH 104 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MPPNMNMESE DESEVSSQVA SNASVYSKEE SRNTSSCLDD SFINKPVTLD LTLGLNGSPE 60 PDLKPPSDAV ANNPPPPSSR VFSCNYCRRK FYSSQALGGH QNAHKRERTL AKRAMRMEMF 120 SDRYASLASL PLHGSAFRSL GIQAHASMHP EQGIRGGGGG ARFIDQGYFG LPLCMEYEEG 180 ELSWPGSFRQ MEGLRGHPAF ESGQGSDMAG GAALPPRREH SSLPDLNLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	3e-41	C2H2 family protein