PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55873.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

DBB

Protein Properties

Length: 391aa MW: 44193.3 Da PI: 6.1002

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21	7e-07	2	45	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 e++C+ ++ + fC+++ +lC +C + H+ Ht++ TEY55873.1 2 EKRCEFCKGLRPVVFCKSDAAYLCLSCDAKVHSAnalsyrHTRT 45 689****99*******************668888888875 PP
2	zf-B_box	17.2	1.1e-05	46	81	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 +C+ + ++++ C d ++++C++C + H++ H TEY55873.1 46 LVCESCRNQPALVRCLDHHMFMCQSCDTIRHSSlhH 81 58*****************************87955 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEKRCEFCKG LRPVVFCKSD AAYLCLSCDA KVHSANALSY RHTRTLVCES CRNQPALVRC 60 LDHHMFMCQS CDTIRHSSLH HNKKIVSCYV GCPSAKDLAE LWGFEIKQSA EDSDVSSLVV 120 NDGSQDKSRC CMILKQILEL ERLQLSEGID DSCLAHVKER SGRWSFKHEA TWKEHRMLED 180 QHLDHSGHDF QVRKSEESPF HQLDSLAGNG NPMAGDAFWQ NRSPLHNNEI WAQNMQDLGV 240 CDEVGSFEDV NIPDVDVTFQ SFEELFGSEQ EPTNSFEDEH PSFHATKIEQ SNDMDKEMAT 300 WVSLFSVSRI TGESSVSHSN DDETFPKHVS GDVDVTKLKN ATMRYKDKKA SRNEKQAQNT 360 CPRSKSNFKK RGNSQVLKAE GDCGSSVSTI I

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEKRCEFCKG LRPVVFCKSD AAYLCLSCDA KVHSANALSY RHTRTLVCES CRNQPALVRC  60
LDHHMFMCQS CDTIRHSSLH HNKKIVSCYV GCPSAKDLAE LWGFEIKQSA EDSDVSSLVV  120
NDGSQDKSRC CMILKQILEL ERLQLSEGID DSCLAHVKER SGRWSFKHEA TWKEHRMLED  180
QHLDHSGHDF QVRKSEESPF HQLDSLAGNG NPMAGDAFWQ NRSPLHNNEI WAQNMQDLGV  240
CDEVGSFEDV NIPDVDVTFQ SFEELFGSEQ EPTNSFEDEH PSFHATKIEQ SNDMDKEMAT  300
WVSLFSVSRI TGESSVSHSN DDETFPKHVS GDVDVTKLKN ATMRYKDKKA SRNEKQAQNT  360
CPRSKSNFKK RGNSQVLKAE GDCGSSVSTI I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	5e-34	CO-like family protein