PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY55838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 231aa MW: 25090.6 Da PI: 5.7072 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 92.1 | 6.7e-29 | 4 | 104 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C++dC+l+p++ p++q++++ +++k++G++ +l+ll+a+p+ +r+d+++sl+yeA+ r+ +P++G+vg+++++++ +++++++ TEY55838.1 4 SCNGCRVLRKGCSEDCILRPCLywlnsPQSQSNATFFLAKFYGRAGLLNLLAAAPPPTRPDIFKSLLYEACGRIINPIHGSVGLMSSGEWPRCHAAVNA 102 6*****************************************************************************************999998877 PP DUF260 95 al 96 +l TEY55838.1 103 VL 104 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MRLSCNGCRV LRKGCSEDCI LRPCLYWLNS PQSQSNATFF LAKFYGRAGL LNLLAAAPPP 60 TRPDIFKSLL YEACGRIINP IHGSVGLMSS GEWPRCHAAV NAVLGGAQLI STLCDIRHVS 120 KGSAGTRCRR RRSASLADSA AAEYVSEAEA EAKFTITGWD DSKELVIGEE FRRGPSHDSF 180 SVETVETSLM LFDKGTVPET GLSEVELELS LGINPLLQTY LSTVIDISDS E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67100.1 | 1e-44 | LBD family protein |