PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55817.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family RAV
Protein Properties Length: 339aa    MW: 37936.5 Da    PI: 9.4744
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.33.9e-1356104155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s++kGV   + +grW A+I++      ++r++lg+f  ++eAa+a++ a+++++g
  TEY55817.1  56 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEDEAARAYDTAAQRFRG 104
                 689***9788.8*********3.....5**********99*************98 PP
2B3102.42.5e-32179276194
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+ tpsdv+k++rlv+pk++ae+h    +g++ +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v F+++   +++l++
  TEY55817.1 179 FEKAVTPSDVGKLNRLVIPKQHAERHfplqSGNSSKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKDLRAGDVVSFQRSTGPDKQLYI 276
                 89****************************888899***************************************************87656666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDGSSVDESS TTDSLSMTPP RPRPPVKSLD RVGSGASVVL DAEHGVEAES RKLPSSRFKG  60
VVPQPNGRWG AQIYEKHQRV WLGTFNEEDE AARAYDTAAQ RFRGRDAVTN FKPLSDTAAD  120
EAESAFLSSH SKAEIVDMLR KHTYSDELEQ SRRCFGAGGN NRSPDQSVFS SAKAREQLFE  180
KAVTPSDVGK LNRLVIPKQH AERHFPLQSG NSSKGVLLNF EDVNGKVWRF RYSYWNSSQS  240
YVLTKGWSRF VKEKDLRAGD VVSFQRSTGP DKQLYIDWKV MTGREAEPAG SNRVQMVRLF  300
GVNIFEAVAV DRCGSGKRAR EIEEMEIISA KKQRIIDVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.11e-152RAV family protein