PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55478.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 504aa    MW: 56346.2 Da    PI: 5.1215
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS256.68.9e-791224941374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfshlt 97 
                 lv+ Ll+cAe v++++ e+a +lL +   ++s++g+ ++Rl++yf e+L +r+ r++ ++  +   ++ ++  ++ + +  ++  f++  P+ +++ ++
  TEY55478.1 122 LVQCLLSCAEKVDKKEYEEAYKLLLECDRMSSSRGSVVERLVFYFSEGLYERIDREMGRVTPKGLGKKFEDPLVAVRSSDETMiaFHNELPVSQITKFA 220
                 6899***************************************************666666555445554434333333322245************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL. 194
                   qa+++ v ++++vH iDf+i +G+Q + L+qaL +R+++p   lRi +v     + +  +e+tg+rLa+fA +lg++f+f+v+v+++l +l+ +++ 
  TEY55478.1 221 GMQAVVDNVGEARKVHFIDFEIRNGIQCIILMQALVDRRGDPLdGLRISAVCV-GGETRAGVEATGRRLASFAGSLGLSFSFEVVVVEDLLELDEKSFs 318
                 **************************************9766559******99.445999*************************************95 PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                 rv+ +E+++V   + l ++   + +l++    v+k+ ++l+ +v+vv+e ea++ns+ F+erf+ea+ +y a f+s++  + r +e+r   E+ ++g +
  TEY55478.1 319 RVDVDEVVVVYAEYTLSYMIGGPDQLHH----VMKVARGLRFRVMVVAEVEANCNSPVFVERFVEAMLFYGAYFESMAGCV-RSEEHRCIAEATCFGSS 412
                 5667***************966666666....*********************************************9996.8889************* PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i+nvva+eg+er+ rh   + Wr+ + ++GF++ +ls + + qa+l++++++ +  ++   + +sl++gWk+ p+ s+SaWr
  TEY55478.1 413 IRNVVAAEGRERKIRHVGIGVWRAFFARFGFEETELSMSSVYQANLVVKNFAsGSFFTFGIDGKSLIIGWKGTPMSSISAWR 494
                 ****************************************************77779************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    
MDIDSFSCDE DFFDDFTNSA HLFHDDVLKR VVSINSPKKQ FNILNKYASR CRRLNGDNLN  60
FSIYEREGQV ISSPSVETLI HLGAEKFIKS SSKVSDELSV LSHPYPSSVL CQSEEDCVGV  120
RLVQCLLSCA EKVDKKEYEE AYKLLLECDR MSSSRGSVVE RLVFYFSEGL YERIDREMGR  180
VTPKGLGKKF EDPLVAVRSS DETMIAFHNE LPVSQITKFA GMQAVVDNVG EARKVHFIDF  240
EIRNGIQCII LMQALVDRRG DPLDGLRISA VCVGGETRAG VEATGRRLAS FAGSLGLSFS  300
FEVVVVEDLL ELDEKSFSRV DVDEVVVVYA EYTLSYMIGG PDQLHHVMKV ARGLRFRVMV  360
VAEVEANCNS PVFVERFVEA MLFYGAYFES MAGCVRSEEH RCIAEATCFG SSIRNVVAAE  420
GRERKIRHVG IGVWRAFFAR FGFEETELSM SSVYQANLVV KNFASGSFFT FGIDGKSLII  480
GWKGTPMSSI SAWRFDVPSD SNAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-38GRAS family protein