PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55477.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 477aa    MW: 53896.3 Da    PI: 7.2
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS185.24.6e-571044674374
        GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshltaNqa 101
                  Ll++Ae +s++d  +a++lL  + +   +   p++R+++++++ L++r+  +  ++    ++++ + +++ + ++ + l   +  P++++s+ +a q+
  TEY55477.1 104 MLLNAAEEFSNEDYDQAESLLVSVPT---SGHLPIERVITCYAKYLSERIDAKKCRIDLERQVNHFDLEEHMRDIKETILaCEQKLPLIQISNYAAIQT 199
                 699******************98764...4558******************977666666666666555544444444444999*************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 Il++++++e++H iD++ + +  W+ ++qaL++R+  +  +l+iT+v s    s  ++ e g+ L+++Ae++++p+ f++l+a+  ++l   +++ ++g
  TEY55477.1 200 ILDSLSSAEKIHFIDIGRKLCSYWIVMMQALSNRKnCQLKQLKITAVCS----SVYNVAESGKLLSSIAESMNIPLVFKTLLAE-KNTLANLHFESEEG 293
                 ********************************99945667*********....99*************************8554.3444344566777* PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 E++aV + ++lh l + + ++e     +L+ +k+l+P+v+v ++ e + +++sF erf  al + sa+ d+le+ l  e +   ++Er  ++++i+n v
  TEY55477.1 294 EKVAVFMDHSLHCLAACTKNVEG----LLRGLKRLNPHVMVAIDVEESFTTSSFGERFRGALPMSSAVVDCLESCLEGERRCIDVIERLHFQESICNGV 388
                 **************966666666....************************************************************************ PP

        GRAS 299 acegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++e ++   +  h++   Wre ++++G  + ++se   +qa+l++ + + +   ++  + +s++l+Wk+ pL +vSaW+
  TEY55477.1 389 MNEDTSgiGFSHHRRIDFWREYFSRFGILETEMSEASLCQARLMIGERAcWSSCSLGMNGKSMILCWKGIPLRFVSAWK 467
                 ***99966689**************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MVEKSKLQIS PSNLQGSFAL LSKYRTQTKR LREGVPNQLQ TDQKNEARCA LTSQALSAVT  60
IVKMALHFHP TSLKTGDFIN LAESLGFKPD LSSQNENHLK HVLMLLNAAE EFSNEDYDQA  120
ESLLVSVPTS GHLPIERVIT CYAKYLSERI DAKKCRIDLE RQVNHFDLEE HMRDIKETIL  180
ACEQKLPLIQ ISNYAAIQTI LDSLSSAEKI HFIDIGRKLC SYWIVMMQAL SNRKNCQLKQ  240
LKITAVCSSV YNVAESGKLL SSIAESMNIP LVFKTLLAEK NTLANLHFES EEGEKVAVFM  300
DHSLHCLAAC TKNVEGLLRG LKRLNPHVMV AIDVEESFTT SSFGERFRGA LPMSSAVVDC  360
LESCLEGERR CIDVIERLHF QESICNGVMN EDTSGIGFSH HRRIDFWREY FSRFGILETE  420
MSEASLCQAR LMIGERACWS SCSLGMNGKS MILCWKGIPL RFVSAWKFPL IIQIHHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.12e-24GRAS family protein