PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55474.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 383aa MW: 43520.2 Da PI: 7.1122

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	105.9	5.5e-33	149	314	108	284
GRAS 108 geervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnl 206 ++er+H iDf+ + G W+ ++aLa +g +l+i +v s ++++eetg+ L++fAe++++pf f++l+ +++ +++ ++L+++ gE++a+ + TEY55474.1 149 ESERIHFIDFGPKFGSYWILVMDALAR--QGVKQLKISAVFS----ATDSVEETGNLLTSFAESMNLPFVFKILHLDTW-EFKKDHLQLEAGETVAIFM 240 569*********************8..5889*****....99*********************866655.6889*********** PP GRAS 207 vlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 + l+ l d++ + +L+ + +l+P ++v++ ead n+ +F+ rf eal alfdslea l+r ++ r++ TEY55474.1 241 EFCLMPLSDHPNGIGA----LLRGIEDLNPLTLIVIDVEADINALNFAPRFKEALFLTCALFDSLEACLGRGNHYRKW 314 ***977777777....************************************************99977654 PP
2	GRAS	23.3	7e-08	321	380	316	374
GRAS 316 rerleeaGFkpvplsekaakqaklllrkvksdgy.rveeesgslvlgWkdrpLvsvSaWr 374 r+ + ++G+ + +ls+ + qa+l+++ +s+ y +++ + +s+++gW++ p+ +vSaW+ TEY55474.1 321 RKYFVKFGLVETELSQPSMHQARLMVKGSPSWSYcTLKMNGKSMIIGWNGIPIQFVSAWK 380 456889**********************666527888888999************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MWRKGKDMAE EANNELPPHD IEANSNVPRG PFALLNRYGN KLKRLSSKGG ENSLKSQLLS 60 AVTIMNMAEK VLSQSIHEKR GDVSNLVEAF GSDYADHLKH VLWLLDASEK LTKRQEKIDV 120 ERGRIDLERE VEHVDIEKAV MDLKVGVVES ERIHFIDFGP KFGSYWILVM DALARQGVKQ 180 LKISAVFSAT DSVEETGNLL TSFAESMNLP FVFKILHLDT WEFKKDHLQL EAGETVAIFM 240 EFCLMPLSDH PNGIGALLRG IEDLNPLTLI VIDVEADINA LNFAPRFKEA LFLTCALFDS 300 LEACLGRGNH YRKWRRSTFR RKYFVKFGLV ETELSQPSMH QARLMVKGSP SWSYCTLKMN 360 GKSMIIGWNG IPIQFVSAWK FQQ

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MWRKGKDMAE EANNELPPHD IEANSNVPRG PFALLNRYGN KLKRLSSKGG ENSLKSQLLS  60
AVTIMNMAEK VLSQSIHEKR GDVSNLVEAF GSDYADHLKH VLWLLDASEK LTKRQEKIDV  120
ERGRIDLERE VEHVDIEKAV MDLKVGVVES ERIHFIDFGP KFGSYWILVM DALARQGVKQ  180
LKISAVFSAT DSVEETGNLL TSFAESMNLP FVFKILHLDT WEFKKDHLQL EAGETVAIFM  240
EFCLMPLSDH PNGIGALLRG IEDLNPLTLI VIDVEADINA LNFAPRFKEA LFLTCALFDS  300
LEACLGRGNH YRKWRRSTFR RKYFVKFGLV ETELSQPSMH QARLMVKGSP SWSYCTLKMN  360
GKSMIIGWNG IPIQFVSAWK FQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66350.1	7e-18	GRAS family protein