PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY55295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 122aa MW: 13623.8 Da PI: 8.6633 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.3 | 3.5e-40 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC++apyfp+++p++fa+vhk+FGasnv k+l++lp + r +a+++l+yeA +r++dPvyG++g++ +l++ql+ ++ +la++k+ TEY55295.1 5 RCAACKHLRRRCPSDCIFAPYFPSNNPRRFAYVHKIFGASNVGKILQDLPVSYRGEAANTLCYEAYCRIKDPVYGCAGIVDQLNEQLKVAEYQLATIKA 103 6********************************************************************************************999886 PP DUF260 100 e 100 TEY55295.1 104 A 104 5 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 122 aa Download sequence |
MNSSRCAACK HLRRRCPSDC IFAPYFPSNN PRRFAYVHKI FGASNVGKIL QDLPVSYRGE 60 AANTLCYEAY CRIKDPVYGC AGIVDQLNEQ LKVAEYQLAT IKAAITSALQ PSYLLDQSLP 120 ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26660.1 | 1e-45 | LBD family protein |