PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY55213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 212aa MW: 23973.6 Da PI: 9.9854 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 56 | 5.2e-18 | 10 | 50 | 2 | 42 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 +i+n+s r+ tf kR++g++KK +ELS+LC++e + i++s+ TEY55213.1 10 FISNDSARKATFKKRKKGLMKKVSELSTLCGIESCAIVYSP 50 8***************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MTRKKVKLAF ISNDSARKAT FKKRKKGLMK KVSELSTLCG IESCAIVYSP YESQPDVWPD 60 ARGAGRVVAQ FKRMPEMEQS KKMVNQESFI RGRIAKAAEQ LKKLRKENRE KEVTHLMYHC 120 LTGKGGLHGL GLPDLNDVAW MLDYNLKEIY KRIEAIGKDR AAPEERAQQQ QMFAEWMGNP 180 GGDQQIGGEE MIVPFNDGGN QGVSLWSNAF FS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 25 | RKKVKLAFISNDSARKATFKKRK |
2 | 22 | 26 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 2e-46 | M-type_MADS family protein |