PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY54594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 129aa MW: 14306.2 Da PI: 5.74 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 39.3 | 8.5e-13 | 10 | 55 | 2 | 47 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 i nks r++tf+kRr+g++ K eEL+ d e vi fs g+ y TEY54594.1 10 LIANKSYRHTTFTKRRKGLMNKTEELCRASDSEGIVISFSDAGNCY 55 699*************************************999865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MVRRNIEIKL IANKSYRHTT FTKRRKGLMN KTEELCRASD SEGIVISFSD AGNCYCLGHP 60 DIGSVLHRYL GEEERVRGGE EAEKIMGDAL ESGEWAEAAK GLGLDGLDRF YAELENVSRK 120 LEALAAALS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 2e-14 | M-type_MADS family protein |