PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY54474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 255aa MW: 26296.6 Da PI: 8.6634 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 32.1 | 2e-10 | 62 | 87 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C+ f G Ck+Gd+C+FaHg+ TEY54474.1 62 KTKVCNKFKTEGGCKFGDKCHFAHGE 87 89**********************96 PP | |||||||
2 | zf-CCCH | 33.8 | 5.6e-11 | 223 | 248 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +kt+lC +f + G C +G+rC+FaHg+ TEY54474.1 223 FKTKLCENFTK-GSCTFGERCHFAHGE 248 69*********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEGEKRGSVS GCPFGENCHF LHYVPGGYNA VAQMMNLAPA PTPRTAGGPM HGQNGSAPGA 60 VKTKVCNKFK TEGGCKFGDK CHFAHGEWEL GKPIAPSHED HRGGGGGPMP GRFGGGRMEP 120 PPAASFGASA TAKISVDASL AGAVIGKGGV NSKQICRQTG AKLSIRDHET DPNLRNIELE 180 GTFEQIQQAS AMVRELIVSI GPGSGLGKGF GGGGGPASTG SNFKTKLCEN FTKGSCTFGE 240 RCHFAHGEAE LRKTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 3e-57 | C3H family protein |