PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53226.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HRT-like

Protein Properties

Length: 384aa MW: 42904.7 Da PI: 10.2374

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	50.6	3.2e-16	258	288	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv++++GsvC+ +Pv gRKRC+ HKG Ri TEY53226.1 258 ICGVATGHGSVCTSSPVAGRKRCAVHKGPRI 288 8***************************997 PP
2	HRT-like	55.4	1e-17	347	377	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CG+iledGs+Ckr Pv+g+KRC eHKG+Ri TEY53226.1 347 TCGFILEDGSPCKRCPVQGNKRCLEHKGRRI 377 7*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MGVRSRSSAS DTTTRLKRED FRRTKHDSAF SHWKILIGAF DWEDHSMGKE GVERYRTQNL 60 PNWTSCPGVY ELGVAQSGKE TRKLDSASVI PVYLGQADNL RIRLQQYGRN GAHLENGCST 120 SKTVDCQSVF AHKGLGLFTD IFSRGLPIVY RCAPMKSKKE AEITEKQLLD RFDYAWNKGS 180 NVSRRQDDIY KKLELLESAS KFSLLAKKSL FSKQREVGIK IGNGSNTGNS SIFSRILGVR 240 RLQARPVQSD CGEFGDNICG VATGHGSVCT SSPVAGRKRC AVHKGPRISG YSLKLDTKVR 300 VPPNAASLKS SVETDQECND FQDQTRRYIT ENRHPCEKAT SKKVNLTCGF ILEDGSPCKR 360 CPVQGNKRCL EHKGRRIRRS KLSS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MGVRSRSSAS DTTTRLKRED FRRTKHDSAF SHWKILIGAF DWEDHSMGKE GVERYRTQNL  60
PNWTSCPGVY ELGVAQSGKE TRKLDSASVI PVYLGQADNL RIRLQQYGRN GAHLENGCST  120
SKTVDCQSVF AHKGLGLFTD IFSRGLPIVY RCAPMKSKKE AEITEKQLLD RFDYAWNKGS  180
NVSRRQDDIY KKLELLESAS KFSLLAKKSL FSKQREVGIK IGNGSNTGNS SIFSRILGVR  240
RLQARPVQSD CGEFGDNICG VATGHGSVCT SSPVAGRKRC AVHKGPRISG YSLKLDTKVR  300
VPPNAASLKS SVETDQECND FQDQTRRYIT ENRHPCEKAT SKKVNLTCGF ILEDGSPCKR  360
CPVQGNKRCL EHKGRRIRRS KLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	6e-79	HRT-like family protein