 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY53184.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
| Family | GeBP | ||||||||
| Protein Properties | Length: 323aa MW: 36990.2 Da PI: 9.3673 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 109 | 3.3e-34 | 131 | 223 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
+fqr+ws++Deiv+L+G+id+ ak +++p++di f++f+k++++ s+ ql++Kirr+KkKf+kk k+ gke++fsk+h+q++++lsk+iWg
TEY53184.1 131 RFQRIWSKDDEIVILKGMIDYLAKYKTDPTQDIGMFHSFIKEELQTYGSQMQLLDKIRRMKKKFEKKIKN---GKEMTFSKPHEQSVYDLSKMIWG 223
79***************************************************************99999...**********************8 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 323 aa Download sequence |
MSRNRETPSD SSEEDDEVTS EEDSDSGLEP QQTQSAMARP LLRLPPPSSS SSPEESDTDL 60 MQRPLAAKPM KEIRLKPVDD SNLRFMLVRV SHGINSSDAA DVVTPKCDVE DARAALRDAK 120 KSETSDRKSN RFQRIWSKDD EIVILKGMID YLAKYKTDPT QDIGMFHSFI KEELQTYGSQ 180 MQLLDKIRRM KKKFEKKIKN GKEMTFSKPH EQSVYDLSKM IWGNKEKPVV VNSGMVRRSD 240 RKKESEKAVE KKKRRVDLNY PGAMTMNEKL LMDGGDLFES GQGLNGEKEW KKLRVEELQN 300 YLKQLEVRVA QTKLILAAMV KHS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 241 | 255 | RKKESEKAVEKKKRR |
| 2 | 251 | 255 | KKKRR |
| 3 | 251 | 256 | KKKRRV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G61730.1 | 6e-15 | GeBP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|