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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TEY52738.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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| Family | Trihelix | ||||||||
| Protein Properties | Length: 340aa MW: 38276.1 Da PI: 4.4792 | ||||||||
| Description | Trihelix family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | trihelix | 49.2 | 1.4e-15 | 118 | 203 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++e+ +L++a e+ + +r++l+ W+evs+k+ + ++er+ +qC+++++ l+k+ykk+k+ ++++ ++ yf++++
TEY52738.1 118 WTERETSVLLDAWGERYLKRGRKSLRSEEWQEVSEKVsQGSQIERTDTQCRNRLDTLKKKYKKEKAKLGENNGSMACKWIYFTKMD 203
*************************************555678***************************98888889******97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 340 aa Download sequence |
MSDEDDNAMS LNDEKFPNQN VSYPQNDGKS YIDVEEDDDD DDDDGGDGVL RIGIDDYGGG 60 GDTTDDDDDE PGDPLRHPKK RKLKTLLSSY EFARRIPASP SPSVPKPSYG GRNPLLDWTE 120 RETSVLLDAW GERYLKRGRK SLRSEEWQEV SEKVSQGSQI ERTDTQCRNR LDTLKKKYKK 180 EKAKLGENNG SMACKWIYFT KMDGLLSSPM PQAGLSGGMD VLTNPKAYLN QPNGVNETRD 240 SPVDSGGDGE GESDGLPPKR GSNGVFKMLA DSIHKFSEIY QKIELSKRQQ MVELEKMRMD 300 FHRDMDLQKR QILEKAQADI EKIWHGDDED NDALPENVSG |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 136 | 180 | KRGRKSLRSEEWQEVSEKVSQGSQIERTDTQCRNRLDTLKKKYKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G24490.1 | 1e-51 | Trihelix family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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