PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52328.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

E2F/DP

Protein Properties

Length: 396aa MW: 44021.5 Da PI: 4.6812

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	80	2.1e-25	102	167	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL llt+kf++l+++se gi++ln++a+ L +v ++RRiYDi+NVLe+++liek+ kn i+wkg TEY52328.1 102 RYDSSLALLTKKFINLIKHSEGGILELNKAAEIL---EV--QKRRIYDITNVLEGIGLIEKTLKNIIQWKG 167 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MKPPFGGGGV DYRHFTAAAS HPNTPPSLKR KSNYGTISAD RNVSPGTSAF LNSPHRTPVS 60 LKSEKVQKVP RSNKANRAIC QSPTTNIDSP SGDNLTPVGS CRYDSSLALL TKKFINLIKH 120 SEGGILELNK AAEILEVQKR RIYDITNVLE GIGLIEKTLK NIIQWKGTDV RRPGEVDETL 180 PDIQEEMQNL NSEECKVDKR IREMQEKLRG LSEDEDNQRW LFITEEDMKN LPCFENETLI 240 AIKAPHGTTL EVPEPDEAGD YPQRRYKIVL RSTMGPIDVY LVSQFEEINA YEAQSSVLET 300 SSVNETPPAV APTEEITLDE IIVQGGVQKA GSSHDFGSVM KKIVPDVDSD ADYYLMSEMD 360 VSITDMWRTE HEVEWDTLNV SSISPPCTTI IPSVGS

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MKPPFGGGGV DYRHFTAAAS HPNTPPSLKR KSNYGTISAD RNVSPGTSAF LNSPHRTPVS  60
LKSEKVQKVP RSNKANRAIC QSPTTNIDSP SGDNLTPVGS CRYDSSLALL TKKFINLIKH  120
SEGGILELNK AAEILEVQKR RIYDITNVLE GIGLIEKTLK NIIQWKGTDV RRPGEVDETL  180
PDIQEEMQNL NSEECKVDKR IREMQEKLRG LSEDEDNQRW LFITEEDMKN LPCFENETLI  240
AIKAPHGTTL EVPEPDEAGD YPQRRYKIVL RSTMGPIDVY LVSQFEEINA YEAQSSVLET  300
SSVNETPPAV APTEEITLDE IIVQGGVQKA GSSHDFGSVM KKIVPDVDSD ADYYLMSEMD  360
VSITDMWRTE HEVEWDTLNV SSISPPCTTI IPSVGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-119	E2F/DP family protein