PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52262.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 379aa MW: 41299.1 Da PI: 7.4735

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72	6.9e-23	66	109	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrC+RtDGKkWRCsr+v + +k+CErHl rgr rsrk++e TEY52262.1 66 DPEPGRCKRTDGKKWRCSREVAPHQKYCERHLRRGRPRSRKPVE 109 79***************************************998 PP
2	QLQ	51	4.4e-18	8	40	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q+++yKy+++++PvPp+Ll++ TEY52262.1 8 PFTFAQWKELERQAMVYKYMISSVPVPPDLLFP 40 8*****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MAAAAAFPFT FAQWKELERQ AMVYKYMISS VPVPPDLLFP HSRNFSAAHL DCAPSLYNVR 60 YSRNGDPEPG RCKRTDGKKW RCSREVAPHQ KYCERHLRRG RPRSRKPVEV KNNGEILKKT 120 RTEKSHVPSS TTVSAQQFAA GKNDNTPLLL FNAKNDPSVS VAPSSYKGPA RNSSLMMEGQ 180 MDGSDQRWQH LIESNTGYVN VGISSVNDSS SLFTQDYLEQ QQSLNMLSYS NFSAPGINAP 240 TGFIDAWSIN NLDSSNSGNA ESSVTMNHGN MSPSLNLSIA MAAGNIVDQS MRSIECCDEK 300 DPRCIDPLYW EPFARGGPLA EALQPGSVAI SSCDSIGAPA TNVSSPTGVL HLFSHSDGSV 360 CSSPVPAAPT SEISFNGFY

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MAAAAAFPFT FAQWKELERQ AMVYKYMISS VPVPPDLLFP HSRNFSAAHL DCAPSLYNVR  60
YSRNGDPEPG RCKRTDGKKW RCSREVAPHQ KYCERHLRRG RPRSRKPVEV KNNGEILKKT  120
RTEKSHVPSS TTVSAQQFAA GKNDNTPLLL FNAKNDPSVS VAPSSYKGPA RNSSLMMEGQ  180
MDGSDQRWQH LIESNTGYVN VGISSVNDSS SLFTQDYLEQ QQSLNMLSYS NFSAPGINAP  240
TGFIDAWSIN NLDSSNSGNA ESSVTMNHGN MSPSLNLSIA MAAGNIVDQS MRSIECCDEK  300
DPRCIDPLYW EPFARGGPLA EALQPGSVAI SSCDSIGAPA TNVSSPTGVL HLFSHSDGSV  360
CSSPVPAAPT SEISFNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-33	GRF family protein