PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY52248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 221aa MW: 24434.2 Da PI: 8.3954 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00038 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H TEY52248.1 79 YQCKTCTRTFPSFQALGGHRASH 101 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 14.2 | 0.00013 | 144 | 166 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H TEY52248.1 144 HECSICGSEFSSGQALGGHMRRH 166 78********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence |
MKNSQIMEEL SPSNDHIIAK GKRTKRPRPS SSSSSSDVTS NFSPTTSTGI STSTEEDEDL 60 ANCLILLARG NRKHGDNVYQ CKTCTRTFPS FQALGGHRAS HKKPKPSAQF YPPPERAESE 120 EEEEESKFVK INTITLSPSR PKIHECSICG SEFSSGQALG GHMRRHRSNS SHRDHQKARN 180 MLSLDLNLPA PLEEAEFHAF SSGQKPRLVF AAAAPLVDCH Y |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 25 | 29 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03510.1 | 1e-34 | C2H2 family protein |