PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50444.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 547aa MW: 61046.3 Da PI: 7.9395

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90.7	1.5e-28	49	139	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++lk+plWeevs+++ +e gf+rs+k+Ckek+en+ k++k++k+g+ ++ ++ + +++fdqlea TEY50444.1 49 RWPRQETLALLKIRSDMDVTFRDASLKGPLWEEVSRRClvfrkmAELGFQRSAKKCKEKFENVFKYHKRTKDGRASK--QDAKAYRFFDQLEA 139 8************************************************************************95..67778*****85 PP
2	trihelix	104.2	9.8e-33	384	469	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r+++e +++++ k+plWee+sk+m+ g+ rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a TEY50444.1 384 RWPKAEVEALIKLRKDLEVKYQESGPKGPLWEEISKAMSGIGYCRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 469 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MMLGVSGLIS PESGGASGGS SEAGGAASSA LASGVDENEK IGGGGGGNRW PRQETLALLK 60 IRSDMDVTFR DASLKGPLWE EVSRRCLVFR KMAELGFQRS AKKCKEKFEN VFKYHKRTKD 120 GRASKQDAKA YRFFDQLEAL ENTSPNNHHF SPPPPAAPMP TPVASASPTP LSVVPPKNIS 180 VANPNPIITS SSPFQLQPHQ QQQQLQQIPP YLSNSTSSST SSDEDIQRRS GRKRKWKEYL 240 EKLMTDVVQK QEDLQKKFLE ALERRERDRI AREEAWRVQE MARMNREHEL LLQERSVAAA 300 KDAAVISFLQ KVTGQSNLQI PNYSPMPPPQ SNPNPAPATE LIQIQIQQKA AASPSSTPAK 360 TLEITPHRDN GGGDDHISPS SSSRWPKAEV EALIKLRKDL EVKYQESGPK GPLWEEISKA 420 MSGIGYCRSS KRCKEKWENI NKYFKKVKES NKKRPEDSKT CPYFHQLDAM YKERAKSSVP 480 SFNLGPIMAR PEQQWPQQMH DQNHGNESDN HDEEGDENED DDEEVGDYEM IATKQPANSV 540 TNAVEGG

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MMLGVSGLIS PESGGASGGS SEAGGAASSA LASGVDENEK IGGGGGGNRW PRQETLALLK  60
IRSDMDVTFR DASLKGPLWE EVSRRCLVFR KMAELGFQRS AKKCKEKFEN VFKYHKRTKD  120
GRASKQDAKA YRFFDQLEAL ENTSPNNHHF SPPPPAAPMP TPVASASPTP LSVVPPKNIS  180
VANPNPIITS SSPFQLQPHQ QQQQLQQIPP YLSNSTSSST SSDEDIQRRS GRKRKWKEYL  240
EKLMTDVVQK QEDLQKKFLE ALERRERDRI AREEAWRVQE MARMNREHEL LLQERSVAAA  300
KDAAVISFLQ KVTGQSNLQI PNYSPMPPPQ SNPNPAPATE LIQIQIQQKA AASPSSTPAK  360
TLEITPHRDN GGGDDHISPS SSSRWPKAEV EALIKLRKDL EVKYQESGPK GPLWEEISKA  420
MSGIGYCRSS KRCKEKWENI NKYFKKVKES NKKRPEDSKT CPYFHQLDAM YKERAKSSVP  480
SFNLGPIMAR PEQQWPQQMH DQNHGNESDN HDEEGDENED DDEEVGDYEM IATKQPANSV  540
TNAVEGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-71	Trihelix family protein