PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY49559.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 159aa MW: 18194 Da PI: 10.3226 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.7 | 2.7e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk n+qvtfskRr g+lKKA+E+SvLCda+v ++ifss+gkl ey++ TEY49559.1 9 KRIENKVNQQVTFSKRRSGLLKKANEISVLCDADVGLMIFSSKGKLSEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 73.6 | 5.6e-25 | 87 | 158 | 14 | 85 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 s++ el kLk ++e Lq+++R+l G++Le Ls+keLq+ e+qL+ slkk Rs+Kn+l+ e+i+ + kk + TEY49559.1 87 PGSWNVELGKLKTRVEVLQKNNRNLSGDNLECLSMKELQNFEHQLDASLKKLRSQKNHLMNESISLMHKKVR 158 5689*****************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MGRGKVELKR IENKVNQQVT FSKRRSGLLK KANEISVLCD ADVGLMIFSS KGKLSEYATD 60 SCMERILDRY KRCSSADERK PPDLQSPGSW NVELGKLKTR VEVLQKNNRN LSGDNLECLS 120 MKELQNFEHQ LDASLKKLRS QKNHLMNESI SLMHKKVRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 9e-68 | MIKC_MADS family protein |