PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY48478.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 545aa MW: 60709.4 Da PI: 5.4686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY48478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.7	1.2e-09	64	110	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+ +ErrRR+riN +++Lr+l P K++Ka L ++++ +k L TEY48478.1 64 RNHSDAERRRRERINAHLATLRTLTPGT-----AKMDKAGLLGEVINRVKLL 110 58***********************5.....59***999999887766 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MDFFDGFDGI QGSYMGFEGV VRNLGASPSS SSSSMLLLNS ETGELTMNPR HKMGDANKAL 60 IALRNHSDAE RRRRERINAH LATLRTLTPG TAKMDKAGLL GEVINRVKLL RETAAEATKG 120 TVVPTDVDEV TVEEEEDPND AASTSIRASL CCDFKHELLS DLREAVEALP HSPVMAEIST 180 LGTRMLGVFV ISGLKGQVQP LVASIRQAFR SVMDKFYASE EFSSRNSSSK RRRVSSLFAS 240 SSSIYLGFGQ LIAIVLLIRG SYHMEKDKIT EEEAEAVELV LFQVPECYVY MIPPRKSAAS 300 YRADEWNVNK WTWEGTLKVI SKREECIIRL EDKTTGELYA RAFLRDGELH PVEAVIDSSR 360 YFVLRVEENI DGRLRHAFIG IGFRERSEAY DFQAALHDHM KYLNKKKTAE EMEHQYQHSS 420 SVDYSLKDGE TLVLQLKKKE GGTGSTRSKF FEQKLSNLSL DDKSKNKEGS VSIKLPPPPP 480 APLSPVDAPD RPPLGISPRV SPGKSFENEE STGVEKCEEG EAEATEKKEQ HDAPDDDFGD 540 FQAAR

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MDFFDGFDGI QGSYMGFEGV VRNLGASPSS SSSSMLLLNS ETGELTMNPR HKMGDANKAL  60
IALRNHSDAE RRRRERINAH LATLRTLTPG TAKMDKAGLL GEVINRVKLL RETAAEATKG  120
TVVPTDVDEV TVEEEEDPND AASTSIRASL CCDFKHELLS DLREAVEALP HSPVMAEIST  180
LGTRMLGVFV ISGLKGQVQP LVASIRQAFR SVMDKFYASE EFSSRNSSSK RRRVSSLFAS  240
SSSIYLGFGQ LIAIVLLIRG SYHMEKDKIT EEEAEAVELV LFQVPECYVY MIPPRKSAAS  300
YRADEWNVNK WTWEGTLKVI SKREECIIRL EDKTTGELYA RAFLRDGELH PVEAVIDSSR  360
YFVLRVEENI DGRLRHAFIG IGFRERSEAY DFQAALHDHM KYLNKKKTAE EMEHQYQHSS  420
SVDYSLKDGE TLVLQLKKKE GGTGSTRSKF FEQKLSNLSL DDKSKNKEGS VSIKLPPPPP  480
APLSPVDAPD RPPLGISPRV SPGKSFENEE STGVEKCEEG EAEATEKKEQ HDAPDDDFGD  540
FQAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	75	ERRRRE
2	230	234	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	1e-20	bHLH family protein