PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY47908.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 655aa MW: 73043.4 Da PI: 6.7081

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY47908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.4	1.3e-23	149	249	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kvlt sd++++g +++ +k+a+e+ + ++ +++l+ +d++g +W +k+i+r++++r++lt+GW+ Fv +++L +gD++vF + +++el TEY47908.1 149 FCKVLTASDTSTHGGFSVLRKHANEClppldmtQ--QTPTQELVTKDLHGIEWHFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGENGEL 243 99**************************9643..445569********************************************..4499999 PP EEEEE- CS B3 93 vvkvfr 98 +v+v+ TEY47908.1 244 RVGVRH 249 *986 PP
2	Auxin_resp	96.3	4.5e-32	275	354	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t++ F v+Y+Pr+ s+F++ ++k ++a ++++ vGmRfkm+fe+eds+err+sGt+vgv+++++ +W++SkWrsLk TEY47908.1 275 ASHALLTQTLFVVYYKPRT--SQFIIGLNKCVEAENHRFGVGMRFKMRFEGEDSPERRFSGTIVGVENISS-HWEDSKWRSLK 354 689999**********6..9******************************************776.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MSSRLTGNTQ LWLKTMSGFF GAERVVMANR VPLSQQQYGL SQQQYGCFPA EGGGAKDVMY 60 EELWRACAGP LVDVPQLEAS TNQELNQRIP LFNLPSKILC SVFNINLLTE VDTDEVYAQI 120 TLMPEADQTQ PRSPDISCDE PPRPVVHSFC KVLTASDTST HGGFSVLRKH ANECLPPLDM 180 TQQTPTQELV TKDLHGIEWH FKHIFRGQPR RHLLTTGWST FVTSKRLVAG DSFVFLRGEN 240 GELRVGVRHH ARQQNSIPSS VISSQSMHLG VLATASHALL TQTLFVVYYK PRTSQFIIGL 300 NKCVEAENHR FGVGMRFKMR FEGEDSPERR FSGTIVGVEN ISSHWEDSKW RSLKVQWDEP 360 ASIRRPERVS PWEIEPFVAS VPTGLSPPLM SKHKRARPHV EIPVSDNQTS AVSAIWNLPQ 420 ESHQTNHGLE GHKGNHTSRS VAETGTGAPP NTMTEEAEES KTASAWSIIS NTSALSSVKQ 480 ISSPVSCQTE RKPDTAATCR LFGIDLNNPS TLPLAENSSM VSDDTPQEGD GFVTKQSRAP 540 RKDTQSRHGQ SSRSRTKVQM QGIAVGRAVD LTTLKGYGEL ITELEEMFEI KGELQPRDKW 600 EIVFTDNEGD MMLMGDDPWL EFVNMVRRIY ICSSQEVKKM KGCEGTNLVT QHLGD

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MSSRLTGNTQ LWLKTMSGFF GAERVVMANR VPLSQQQYGL SQQQYGCFPA EGGGAKDVMY  60
EELWRACAGP LVDVPQLEAS TNQELNQRIP LFNLPSKILC SVFNINLLTE VDTDEVYAQI  120
TLMPEADQTQ PRSPDISCDE PPRPVVHSFC KVLTASDTST HGGFSVLRKH ANECLPPLDM  180
TQQTPTQELV TKDLHGIEWH FKHIFRGQPR RHLLTTGWST FVTSKRLVAG DSFVFLRGEN  240
GELRVGVRHH ARQQNSIPSS VISSQSMHLG VLATASHALL TQTLFVVYYK PRTSQFIIGL  300
NKCVEAENHR FGVGMRFKMR FEGEDSPERR FSGTIVGVEN ISSHWEDSKW RSLKVQWDEP  360
ASIRRPERVS PWEIEPFVAS VPTGLSPPLM SKHKRARPHV EIPVSDNQTS AVSAIWNLPQ  420
ESHQTNHGLE GHKGNHTSRS VAETGTGAPP NTMTEEAEES KTASAWSIIS NTSALSSVKQ  480
ISSPVSCQTE RKPDTAATCR LFGIDLNNPS TLPLAENSSM VSDDTPQEGD GFVTKQSRAP  540
RKDTQSRHGQ SSRSRTKVQM QGIAVGRAVD LTTLKGYGEL ITELEEMFEI KGELQPRDKW  600
EIVFTDNEGD MMLMGDDPWL EFVNMVRRIY ICSSQEVKKM KGCEGTNLVT QHLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein