PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY47882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 137aa MW: 15187.3 Da PI: 8.8273 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 36 | 9e-12 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 i nks r++tf+kRr+g++ K eE + d + vi fs g+ TEY47882.1 10 LIANKSYRHTTFTKRRKGLMNKTEEFCKVSDSKGIVISFSDAGN 53 699*************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MVRRKIDIKL IANKSYRHTT FTKRRKGLMN KTEEFCKVSD SKGIVISFSD AGNCFCLGHP 60 DVGSVLNNYL GDSSSAIATE AEKIIGDALE SGKWVEAVKG LRLDGLDRVY VELENATRKL 120 EALAAAKEET QSYGRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65360.1 | 2e-14 | M-type_MADS family protein |