PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY47487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 238aa MW: 26303.7 Da PI: 10.0807 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 22 | 64 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eEd+ll +v+++G+g W+ Ia +++ gR++k+c+ rw++ TEY47487.1 22 WTQEEDDLLTSLVQMHGPGKWDQIATHIP-GRSGKSCRIRWLNQ 64 *****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 41.4 | 3.3e-13 | 71 | 113 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++ eE ++l+ ++++lG++ W+ I ++++ gRt++q+k+ ++ TEY47487.1 71 KKPFSVEEKQRLLVLHRKLGNK-WAVIVHYFP-GRTDNQVKNQYH 113 689*******************.*********.*********996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MATLRTSRGA SLSRKTCRRW HWTQEEDDLL TSLVQMHGPG KWDQIATHIP GRSGKSCRIR 60 WLNQLHPGVD KKPFSVEEKQ RLLVLHRKLG NKWAVIVHYF PGRTDNQVKN QYHILAGTRK 120 SAPFPPRNDP HVPLDNESRG LFQNPSISMV DSHFSGVTSL GTNYHGSAPM VGVMPGLISS 180 SSSVYGMGGY LTQVGTVIPS SFGPRPSYDN SMTSDANSAS VGGYEFMDFF RVGLGSSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33450.1 | 8e-41 | MYB family protein |